Gene Information

Name : Oter_1273 (Oter_1273)
Accession : YP_001818158.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1577718 - 1578491 bp
Length : 774 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSp0947 probable gluconate 5-dehydrogenase oxidoreductase

DNA sequence :
ATGACTGCCTCTTCGTCTCTTTTCGACCTCACTGGCCGCACCGCGTTGATCACCGGCTCCAGTCAGGGACTCGGCCTCGC
GCTCGCACGCGGACTCGCCCAGCACGGCGCCGCGATTGTGCTGAATGGCCGCGATCCCGCGAAAGTCGAAGCCGCCGCCG
CAGACCTGCGCGCCGGCGGCGCCCGCGTGACGAGCGCGGTCTTCGACGTGACGGACGCCCGCGCCGTGACCCACGCGATT
GCGCACGTGCAGGAGACGTTCGGGCCAATCGACATCCTGGTGAACAACGCGGGCATTCACCGTCGCGCGCCACTGCTCGA
GATGCTCGAGAGCCAGTGGCGTGAGGTGCTCGACACGAATCTTACCAGCGCCTTCCTGGTCGCGCGGGCCGTCGCACCCG
GGATGATCGCGCGGCGAGCCGGCAAGATCATCAACGTCTGTTCGCTGATGAGCGAAATCGGCCGCGCGACCACCGGCAAC
TACGCCGCGGCCAAGGGCGGGCTGAAGATGCTGACGCGCGCGATGGCGGTGGAGTGGGCCGAGCACGGGCTTCAGATCAA
TGGAATTGGGCCGGGGTACTTTGCCACCGAGATGACGCAGGCTCTCGTGGAAAACCCGCAGTTCGACGCCTGGTTGAAGC
TGCGCACGCCGGCACGTCGGTGGGGCAAGCCGGAGGAACTCGTGGGCGCGGCGGTGTTCCTCGCCTCGCGGGCGTCGGAT
TTCGTGAACGGCCAGATCCTCTACGTCGACGGCGGCGTGCTGGCGTCGCTGTAG

Protein sequence :
MTASSSLFDLTGRTALITGSSQGLGLALARGLAQHGAAIVLNGRDPAKVEAAAADLRAGGARVTSAVFDVTDARAVTHAI
AHVQETFGPIDILVNNAGIHRRAPLLEMLESQWREVLDTNLTSAFLVARAVAPGMIARRAGKIINVCSLMSEIGRATTGN
YAAAKGGLKMLTRAMAVEWAEHGLQINGIGPGYFATEMTQALVENPQFDAWLKLRTPARRWGKPEELVGAAVFLASRASD
FVNGQILYVDGGVLASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 7e-21 41