Gene Information

Name : Oter_1085 (Oter_1085)
Accession : YP_001817973.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Unknown
Product : type I restriction-modification system, M subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 1342180 - 1343823 bp
Length : 1644 bp
Strand : -
Note : TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: mfa:Mfla_1220 type I restriction-modification system, M subunit

DNA sequence :
ATGACCCACCAAGACCAACAACGCCTCGGCAAGACCCTGTGGGCCATCGCCGACCAATTGCGCGGCGCGATGAACGCGGA
CGACTTCCGCGACTACATGCTGGCGTTCCTCTTCCTGCGCTACCTCTCCGACAATTACGACGTCGCCGCGAAGAAGGAGC
TGGGCTCCGACTATCCCAAGTTCGCCGCCGACGATCCTCGTGTGCCGCTTGCGATCTGGTATGCCAACAATCCGGGCGAC
GTCGTCGACTTCGAGAAGCAGATGCGCCGCAAGGTCCACTACGTCATCAAGCCGGATCACCTCTGGGCCAACATCGCCAA
CCTCGCCCGCAGCGAGAGTGACGAGTTGCTCGAGACTCTCAAAGCCGGTTTCGACTACATCGAAAACGAGTCCTTTCAGA
GCACGTTCCAAGGCCTGTTCTCGGAGATCAATCTTTACTCGGAAAAGCTCGGACGGAGCCAGTCGGAGAAAAACAAGAAG
CTCTGCGGCATCATCAAGAAGATCGCTGACGGGCTGAAGGAGTTCTCCACCGACACCGACACGCTGGGCGACGCCTACGA
ATACCTCATCGGCCAGTTCGCCGCCGGCTCCGGCAAAAAGGCGGGCGAGTTCTACACCCCGCAGCAGATTTCCACGATCC
TCTCGCGCATCGTTACCCTTGATAGCCAGGAACCCAAGACAGGCAAGGTGCCGCACCTCGGCAGCGTATTCGATTTCGCC
TGTGGTTCGGGTTCGCTGCTACTCAACGTCCGCAAGCAAATGGGTGCGCATGGCATCGGCAGAATCTTCGGCCAGGAGAA
GAACATCACGACCTACAATCTCGCGCGCATGAACATGCTGCTGCATGGGGTGAAGGATACCGAGTTCGAGATCTACCACG
GCGACACGCTCACCAACGATTGGGACTTCCTCCGCGAGACGAACCCGGCCAAGATGCCGAAATTCGACGCCGTGGTCGCC
AACCCGCCCTTCAGCCTCCGCTGGGAACCGAAGGATGAGTTGGGTGAGGACGTCCGTTTTAAGAACCACGGCATCGCACC
CAAATCCGCCGCCGACTTCGCCTTCCTCCTCCACGGCTTCCATTATCTAAAGGATCAGGGCGTGATGGCCATCATTCTGC
CGCACGGCGTGCTCTTCCGCGGCGGCGCCGAGGAGCGTATCCGCACGAAGCTGCTCAAGGATGGCCACATCGACACCGTC
ATCGGGCTGCCGGCGAATCTCTTCTACTCCACCGGCATCCCCGTCTGCATCCTCGTCCTCAAGAAATGCAAGAAGCCCGA
CGACGTTCTCTTCATCAACGCCGCCGAACACTTCGACAAAGGCAAACGCCAGAACGTCCTCACCGAGGAACACCTCGAAA
AAATCGTCGCCACCTACCAGCTACGAAAAGAGGAGGCCCGCTACTCCAAGCGCGTCGCAATGGATCGCATCGAGGCCGAA
GGCTACAATCTCAATATCTCCCGCTACATCAGCACCGCTGAGCAAGAGGAGGAGATCGATCTGACCGCGACGCACACCAA
CTTGGTGGAAATCGAGAAGCGGATTCAGACCGCCGCCCAGAAGCACAACGCGTTTCTGAAGGAACTCGGTCTGATCCCGT
TGCCGTTTGGTGAATCGGTCGGGAGTAGAGGTGGAAATGCGTGA

Protein sequence :
MTHQDQQRLGKTLWAIADQLRGAMNADDFRDYMLAFLFLRYLSDNYDVAAKKELGSDYPKFAADDPRVPLAIWYANNPGD
VVDFEKQMRRKVHYVIKPDHLWANIANLARSESDELLETLKAGFDYIENESFQSTFQGLFSEINLYSEKLGRSQSEKNKK
LCGIIKKIADGLKEFSTDTDTLGDAYEYLIGQFAAGSGKKAGEFYTPQQISTILSRIVTLDSQEPKTGKVPHLGSVFDFA
CGSGSLLLNVRKQMGAHGIGRIFGQEKNITTYNLARMNMLLHGVKDTEFEIYHGDTLTNDWDFLRETNPAKMPKFDAVVA
NPPFSLRWEPKDELGEDVRFKNHGIAPKSAADFAFLLHGFHYLKDQGVMAIILPHGVLFRGGAEERIRTKLLKDGHIDTV
IGLPANLFYSTGIPVCILVLKKCKKPDDVLFINAAEHFDKGKRQNVLTEEHLEKIVATYQLRKEEARYSKRVAMDRIEAE
GYNLNISRYISTAEQEEEIDLTATHTNLVEIEKRIQTAAQKHNAFLKELGLIPLPFGESVGSRGGNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 2e-97 43
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 8e-98 43
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 1e-97 43
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 1e-97 43
ORF6 BAC22943.1 - Not tested etd PI Protein 1e-97 43
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 1e-97 43
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 1e-97 43
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 8e-98 43
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-97 43
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 8e-98 43
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 1e-97 43
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 5e-97 43
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 8e-98 43
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-97 43
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 1e-97 43
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 1e-99 43
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 2e-97 43
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 1e-97 43
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-97 43
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 8e-97 42
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 8e-98 42
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-97 42