Gene Information

Name : BamMC406_6417 (BamMC406_6417)
Accession : YP_001816399.1
Strain :
Genome accession: NC_010557
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1023170 - 1026031 bp
Length : 2862 bp
Strand : +
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_5668 ATPase AAA-2 domain protein

DNA sequence :
ATGCCCGCACTTTGCGATATCTGTCACGCCCGGCCGGCCGTCGCGCGCGCCACCGTGATGCAGGACGGCGAGCGCAAGAC
GATCTCGATCTGCGACTACCACTTCCGTCAGCTGATGCGGCATCAGAGCATGCTGAACCCGTTCGATTCGCTGCTGGGCG
GCGGCGCGTCGTCGCTGTTCGGCGAAGGCGGCGACACGTCGCCGCTGGCCGCCGAGATTCCGCGCGAATCGGTCGATCCG
ACCGACGCGTTCAGCGAGCAGACGCTCGAACTGCTGCAGCGTGCGGCCGAGAAGGCGCACGAACTGCGCCGTAGCGAACT
CGACACCGAACACCTGCTATACGCGCTCGCGGATACCGACGTGTGCGCGGCGCTGCTGAAGGAACTGAAGCTGTCGCCGC
AGGACCTGAAGTCCTACATCGACGAGCATGCGCACACCGGCACGGCTGCCGCGGACGCGTCGCTCGACAGGCTGTCGATC
TCGCCGCGCGTGAAGAAGGCCGTGCAGTACGCATTCCAGGCGTCGCGCGATCTCGGCCACTCGTACATCGGCCCCGAGCA
CCTGTTGATCGGTCTCGCGGCGGTGCCGGACAGCATTGCCGGCACGCTGCTGAAGAAATACGGCGTGACGCCGGAAGCGC
TGCGCCAGAAGGTCGTGAAGGTCGTCGGCAAGGGCGCGGAAGACGGCCGAGTCGACGCGCCGACCGGCACGCCGAATCTC
GACAAGTTCGGCCGCGACCTCACCGCGATCGCGCGCCAGGGCAAGCTCGACCCGGTGCTCGGCCGCGCGCAGGAAATCGA
GAGCACGATCGAAGTGCTCGCGCGCCGCAAGAAGAACAACCCGGTGCTGATCGGCGAGCCCGGTGTCGGCAAGACCGCGA
TCGTCGAAGGCCTTGCGCAGCGGATCGTCAACGGCGACGTGCCCGAAGTGCTGCGCGGCAAGCGGCTCGTCGAAGTCAAC
ATCAACTCGATGGTGGCCGGCGCGAAATATCGCGGCGAATTCGAGGAACGCGCGAAGCAGCTGATCGACGAAGTGACGGC
CAAGCATGACGAGCTGATCCTCTTCATCGACGAGCTGCATACGATCGTCGGCGCGGGCCAGGGCGGCGGCGAAGGCGGCC
TCGACATCGCGAACGTGCTGAAGCCGGCGCTCGCGCGCGGCGAGCTGAGCCTGATCGGCGCGACCACGCTCAACGAATAC
CAGAAGCACATCGAGAAGGACGCGGCGCTCGAACGGCGCTTCCAGCCGGTGTTCGTGCCGGAACCGAGCGTCGAGCAGAC
GATCGTGATCCTGCGCGGGCTGCGCGACAGCCTCGAGGCGCACCACCAGGTCACGTTCGCCGACGACGCGTTCGTCGCGG
CCGCCGAGTTCGCCGACCGCTACATCACCGCGCGCTTCCTGCCCGACAAGGCGATCGACCTGATCGACCAGGCCGCCGCG
CGCGTGCGGATCGGCGCCACGTCGCGCCCCGCCGACATCCAGGAAGACGAAGCGCAGATCGTGCAGCTCAAGCGCGAGCA
GGACTACGCAACGTCGCGAAAGCGCTTCGACCAGGCGAAGCAGTTCGAGGAGCAGATCAACGCGAAGCAAAAGTCGCTCG
ACGAAAAGATGGAGGCGTGGCAGCGCAAGACCGGTTCGGAGACGCTGGAAGTGACCGTCGAATCGGTCGCCGAGGTCGTG
TCGCGGCTGACGGGCATTCCGGTGTCCGAGCTCACGCAGGAAGAGCGCCAGAAGCTGCTGAAGATGGAAGAGCAGCTGCG
CGAGCGCGTGATCGGCCAGAACGATGCCGTGGTCGCCGTGAGCGACGCCGTGCGGCTGTCGCGCGCCGGCCTCGGCCAGA
CGCACCGGCCGATCGCGACGTTCCTGTTCCTCGGGCCGACCGGCGTCGGCAAGACCGAGCTCGCGAAGGCGCTGGCCGAG
ACCGTGTTCGGCGACGAGCAGTCGATCATCCGCATCGACATGTCCGAGTACATGGAGCGGCACGCGGTCGCGCGGCTGAT
CGGCGCGCCGCCCGGCTACGTCGGCTACGACGAAGGCGGTCAGCTCACCGAGCGCGTGCGGCGCCGCCCGTACAGCGTGA
TTCTCCTCGACGAGATCGAGAAGGCGCATCCGGACGTCTACAACGTGCTGCTGCAGGTGTTCGACGACGGCCGCCTGACC
GACGGCAAGGGCCGCGTGGTCGACTTCAGCAACACGATCATCATCGCGACGAGCAACCTCGGCGCCGCGATCATCATGGA
CAACCTCACGCAGCCGGAGGCCGCGCGCAAGACCGACAAGGCGATCCGCGAACAGCTGATGCAGGTGCTGAAGGGCCATT
TCCGCCCCGAGTTCCTGAACCGGATCGACGAGGTGATCGTGTTCCATGCGCTGTCGAAGGAGAACATCCGCTCGATCGTG
CAGATCCAGCTCGACCGCGTGGTGCGCACCGCCGCCGCGCAGGACATCACGCTCGTGATGGGCGACGCGCTCGTCGACCA
CCTGACCGAAGCCGGCTATCAACCGGAATTCGGCGCGCGCGAGCTGAAGCGGCAGGTGCGCCAGATCATCGAGACGAAGC
TCGCGAAGGAAATCCTCGCCGACAAGCTGGAGTCCGGCGATCGCGTCGAAGTCGATTACGACAAGGCGAGCGACGCGGTG
ACGTTCAACAAGCTCGCACGGCCCGATGCCAAGGACGCCAAGGACGCCACGGACGCGACCAGGAACGCCGACGGCAAGGC
GCGGCCCAACGGCAAGGCGACGAAGGCGGCGTCCGATGAGAAGGATCACGAAGCGAAGGACGAGACGCCTGCACCCGCGC
CTGCGCCCACAGCCAAGCCATCCGGCAAGAAGTCGTCCGGTGCGAAGAAGGACGCGCAGTGA

Protein sequence :
MPALCDICHARPAVARATVMQDGERKTISICDYHFRQLMRHQSMLNPFDSLLGGGASSLFGEGGDTSPLAAEIPRESVDP
TDAFSEQTLELLQRAAEKAHELRRSELDTEHLLYALADTDVCAALLKELKLSPQDLKSYIDEHAHTGTAAADASLDRLSI
SPRVKKAVQYAFQASRDLGHSYIGPEHLLIGLAAVPDSIAGTLLKKYGVTPEALRQKVVKVVGKGAEDGRVDAPTGTPNL
DKFGRDLTAIARQGKLDPVLGRAQEIESTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEVLRGKRLVEVN
INSMVAGAKYRGEFEERAKQLIDEVTAKHDELILFIDELHTIVGAGQGGGEGGLDIANVLKPALARGELSLIGATTLNEY
QKHIEKDAALERRFQPVFVPEPSVEQTIVILRGLRDSLEAHHQVTFADDAFVAAAEFADRYITARFLPDKAIDLIDQAAA
RVRIGATSRPADIQEDEAQIVQLKREQDYATSRKRFDQAKQFEEQINAKQKSLDEKMEAWQRKTGSETLEVTVESVAEVV
SRLTGIPVSELTQEERQKLLKMEEQLRERVIGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTELAKALAE
TVFGDEQSIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHPDVYNVLLQVFDDGRLT
DGKGRVVDFSNTIIIATSNLGAAIIMDNLTQPEAARKTDKAIREQLMQVLKGHFRPEFLNRIDEVIVFHALSKENIRSIV
QIQLDRVVRTAAAQDITLVMGDALVDHLTEAGYQPEFGARELKRQVRQIIETKLAKEILADKLESGDRVEVDYDKASDAV
TFNKLARPDAKDAKDATDATRNADGKARPNGKATKAASDEKDHEAKDETPAPAPAPTAKPSGKKSSGAKKDAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-163 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_6417 YP_001816399.1 ATPase VFG0079 Protein 0.0 51