Gene Information

Name : BamMC406_5988 (BamMC406_5988)
Accession : YP_001815977.1
Strain :
Genome accession: NC_010557
Putative virulence/resistance : Virulence
Product : ribonuclease III
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 3.1.26.3
Position : 541684 - 542727 bp
Length : 1044 bp
Strand : -
Note : PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_6284 glycosyl transferase, family 2

DNA sequence :
ATGCGCGAATCACTCTACACACCACTCGTCTCGCTGGTCGTGCCGTTCTACAACGAAGGCGAAGCCGTCGAACGCTTCTT
CGACGTCGTGATTCCGTTGATGGCCGGCCTCGACGCGATCCGCTTCGAGATCGTCTGCGTCAACGACGGCAGCCGCGACG
ACACGCTCGAACGCCTCATCCGGATCAGCATGAGCGACCGCCGCGTGCGCGTCATCGATCTCACGCGCAACTTCGGCAAG
GAAGCGGCGCTGACGGCCGGCCTCGACGAAGCCGCCGGCGACGCCGTGATCCCGCTCGACGCCGACCTGCAGGATCCGCC
GAGCCTGATTCCGGTGATGCTCGAGCACTGGCGCGACGGGGTGGAAGTCGTCGCCGCGAAGCGCAGCAACCGCGCCTGCG
ATTCATTCGCCAAGCGCACCGCCGCCTCGATCTACTACCGCGTCCACAACCTGCTGTCGGACGTGAAGCTGCCGGAGAAC
GTCGGCGACTTCCGGCTGATGGATCGCAAGGTCGTGAACGCGCTGCGCAGCCTGCCGGAGCGGCATCGCTTCATGAAGGG
GCTGTTCGCATGGGTCGGCTACCGGACCGTGATCATCGAGTACCAGCGCGAAGCGCGCAGCGCCGGGCACTCGAAGTTCT
CCGGATGGAAGCTGTGGAACTTCGCGCTCGAGGGGATCACGAGCTTCAGCACCGTGCCGCTGCGCAGCTGGACCTATATC
GGCCTGGGCATCGCCGCGCTCTCCTTCCTGTACGGCGCGTTCATCGTGGGTCGTACGCTGCTGTTCGGCAACCCGGTGCT
CGGCTACGCGTCGCTGCTGTCGGTCACGCTGTTCATCGGCGGGATCGAGCTCATCGGCATCGGCGTGGTCGGCGAGTATA
TCGGGCGCATCTACGACGAGTCGAAGCAACGTCCCGTCTATCTGATTCGTCGCCGCTACGAGGCGCACGCCAAGGTGATC
GAGCTGCCGGTCGCGCGCGATGCGCGCCGCACGGCCGCACGCCGCCGCGTCCAGCCGGCCCGCGTGCGGGTCGGCTCGCG
CTGA

Protein sequence :
MRESLYTPLVSLVVPFYNEGEAVERFFDVVIPLMAGLDAIRFEIVCVNDGSRDDTLERLIRISMSDRRVRVIDLTRNFGK
EAALTAGLDEAAGDAVIPLDADLQDPPSLIPVMLEHWRDGVEVVAAKRSNRACDSFAKRTAASIYYRVHNLLSDVKLPEN
VGDFRLMDRKVVNALRSLPERHRFMKGLFAWVGYRTVIIEYQREARSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYI
GLGIAALSFLYGAFIVGRTLLFGNPVLGYASLLSVTLFIGGIELIGIGVVGEYIGRIYDESKQRPVYLIRRRYEAHAKVI
ELPVARDARRTAARRRVQPARVRVGSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 7e-65 57
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-67 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_5988 YP_001815977.1 ribonuclease III VFG0670 Protein 1e-65 56