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Name : BamMC406_5641 (BamMC406_5641) Accession : YP_001815637.1 Strain : Genome accession: NC_010557 Putative virulence/resistance : Virulence Product : HrcV family type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 145422 - 147398 bp Length : 1977 bp Strand : + Note : TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein; KEGG: bam:Bamb_5858 type III secretion protein, HrcV family DNA sequence : ATGCTGAAGACCATCAAGCTGCCCGGCATCGGCGAGGCCGGCATCGCCATCCTGCTGATCGCGATCGTCTCGCTGATGAT CCTGCCGCTGCCGCCCGCCATCATCGATGGTTTGCTCGCCATCAACATCGCGATCAGCATCACGCTGCTCATGGTGACGA TGTACGTCGGCCATATCGCGACGCTGTCGGCGTTCCCGTCGGTACTGCTTTTCACGACGCTTTACCGGCTCTCGCTGAAC ATCGCGTCGACGAAGTCGATCCTGCTGCATGCCGATGCCGGCGAAATCATCGAGAGCTTCGGGCAGCTCGTCGTGGGCGG CAATCTCGTCGTCGGCCTCGTCGTGTTCGTCATCATTTCGGTCGTGCAGTTCATCGTCATCGCCAAAGGCTCGGAACGCG TCGCCGAAGTGGGGGCGCGCTTCACGCTCGATGCGCTGCCCGGCAAGCAGATGAGCATCGACGCTGATCTGCGCGCGAAC ATCCTGACACCGGAGGAGGCGCGCAGCAAACGCGCGCGGCTCGCTATCGAAAGCCAGCTGCACGGCGGCATGGACGGTGC GATGAAGTTCGTGAAAGGCGATGCGATCGCCGGCCTCATGATCACCATGATCAACATCGTCGCGGGCATTGCCGTGGGCG TCGCGTATCACGGCATGTCCGCCGGCGAGGCGGCCAACCGCTTCTCGGTCCTCTCGATCGGCGACGCCATGGTCTCGCAG ATTCCGTCGCTGCTGATCTCGGTGGCCGCGGGCGTCATGATCACGCGCGTGGACGAAGGCGGCGAGCACGGAAACGCCTC GCTCGGCGAGGACATCCGGCGCCAGTTTACGAGCAGCTCGCGCGCGCTCTACTTCGCGTCGCTGCTGCTGCTCGGTTTCG CGGCCGTACCCGGCTTTCCAGCGGCGCTCTTCGCGTTGCTCGCCGGGCTGCTCGGCTTCGTCGGCTACCGGCTGCAGAAA AAGCAGCACGGCTCCGCCAAAGGCGGCGGCAAGCCCGTCGTCGCTCTGCAGCGTGCCGGCGCCCGGGGCGACGCGCCCTC GATCCTGCCGCGCCCGCCGCAGTTCACCTGCCCGCTCGGCGTGCGGCTCGCGCCCGACGTCAGCGCCCGGCTCGCGGCCG ACGCGCTCGACCGCGCGTTCGATGTGCAGCGCCATGCGCTGCAGTCGGAAGTCGGCCTGCCGTTCCCGGGCATCATGATG TGGACCGACGGCAAGCTGCCCGAGGACAGTTACGAAGTGCTCATCTTCGACGTGCCCCAAGGGCGGTCCACACTCGCCGA AACACGCGCCGTACACGCAGCGGCCCACACGGGCGACGCGAAGCCCGATGCGGCTGCGGCCACGCCCGAGGGATTGATCG CTCGCCACACGATCGACCTGCTGCGGCGCAATGCCCATCTCTTTCTCGGCATACAGGAAGCGCAGTGGATGCTCGATCAG CTCAACGAGGACTACCCGGGCCTCGTCGCCGAGGTGCAAAAGGCGCTGCCGCTGCAGAAGATGGCGGACGTGCTGCGCCG GCTGCTGGAGGAGGACGTGCCCGTGCGCAACATCCGCAGCATTACCGAAAGCCTGATCGTCTGGGGGCCGAAGGAGAAGG ACATGCTGATGTTGACCGAATACATCCGCATGGAGCTCGGCCGGCTCATCGCCTATCGCGCGACGGGCGGCCCACGGGAT CTGCCCGTCCTGCTCGTGGACGTTCAGTTGGAGCAGCACATCCGGCAGTCGATCAAGCAGACGCCCACGGGCAACTTCCT CGCGCTGCCGCCCGACGAGATCGCCGGACTCGTCGGCAAAATCGCGGAGATCGTCGGCGACACGCCACGCCAGCCACTCG CGCTCGTCGCCTCGATGGATATCCGGCGCTACATCAAGCGCATGATCGAGGCGCGGCTGCCCTGGCTGCCCGTCTACTCG TACCAGGAGCTCGGCGCTCACGTCGATCTCCAGCCCGTCGGCCGCCTGGCGATGTGA Protein sequence : MLKTIKLPGIGEAGIAILLIAIVSLMILPLPPAIIDGLLAINIAISITLLMVTMYVGHIATLSAFPSVLLFTTLYRLSLN IASTKSILLHADAGEIIESFGQLVVGGNLVVGLVVFVIISVVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAN ILTPEEARSKRARLAIESQLHGGMDGAMKFVKGDAIAGLMITMINIVAGIAVGVAYHGMSAGEAANRFSVLSIGDAMVSQ IPSLLISVAAGVMITRVDEGGEHGNASLGEDIRRQFTSSSRALYFASLLLLGFAAVPGFPAALFALLAGLLGFVGYRLQK KQHGSAKGGGKPVVALQRAGARGDAPSILPRPPQFTCPLGVRLAPDVSARLAADALDRAFDVQRHALQSEVGLPFPGIMM WTDGKLPEDSYEVLIFDVPQGRSTLAETRAVHAAAHTGDAKPDAAAATPEGLIARHTIDLLRRNAHLFLGIQEAQWMLDQ LNEDYPGLVAEVQKALPLQKMADVLRRLLEEDVPVRNIRSITESLIVWGPKEKDMLMLTEYIRMELGRLIAYRATGGPRD LPVLLVDVQLEQHIRQSIKQTPTGNFLALPPDEIAGLVGKIAEIVGDTPRQPLALVASMDIRRYIKRMIEARLPWLPVYS YQELGAHVDLQPVGRLAM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3013 | YP_244081.1 | HrcV protein | Virulence | Hrp PAI | Protein | 2e-152 | 64 |
| hrcV | NP_636603.1 | protein HrcV | Virulence | Hrp PAI | Protein | 2e-152 | 64 |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 2e-151 | 63 |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 6e-151 | 63 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 7e-150 | 63 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 9e-150 | 63 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 2e-151 | 63 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BamMC406_5641 | YP_001815637.1 | HrcV family type III secretion protein | VFG0064 | Protein | 2e-98 | 42 |
| BamMC406_5641 | YP_001815637.1 | HrcV family type III secretion protein | VFG0198 | Protein | 5e-98 | 42 |
| BamMC406_5641 | YP_001815637.1 | HrcV family type III secretion protein | VFG0384 | Protein | 3e-99 | 41 |
