|
Name : Exig_0265 (Exig_0265) Accession : YP_001812768.1 Strain : Exiguobacterium sibiricum 255-15 Genome accession: NC_010556 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 283650 - 285350 bp Length : 1701 bp Strand : + Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bcy:Bcer98_0354 alpha amylase catalytic region DNA sequence : ATGACACAAATGATACCGCGTCCGGAAACGGCACAAAAAACACTTACACGAGCTTGGTGGAAAGAAGCCGTTGCTTACCA AATCTATCCGCGCAGCTTTTATGATGCAAACAATGATGGAATCGGCGATATCCCGGGTATCATTGCCAAGTTGGATTATC TAAAAGATCTCGGAGTCGATGTATTATGGATTTGCCCAATGTTTAAATCACCGAATGATGACAACGGATATGACATCAGT GATTATGAAGACATCATGGACGAATTCGGAACGATGGCCGATTTTGATTTATTAATGGAAGAAGCACATAAACGTGACAT TAAAGTATTACTCGATTTGGTCGTCAACCACACGTCGGATGAACACCCGTGGTTCCTCGAATCCCGTTCGTCAAAAGACA ACGACAAACGGGATTGGTACATCTGGAAAGATGCCGTCAACGGTGGCGAACCGAACAACTGGGAAAGTATTTTCGGAGGA TCGGCTTGGGAATACGACGAAAAAACGGAACAATACTTCCTCCACGTTTTCTCACGCCGTCAGCCGGACTTGAACTGGCG TAATAAAGACATGCGTCAGGCCGTCTATACGATGATCAACTGGTGGCTCGATAAAGGGGTCGACGGATTCCGGATCGATG CCATCAGCCACATTAACAAAGATCAATCGTACGCGGATCTTCCGAATCCACTCGGGATGCCGCATGTGCCATCGTTTGAG ATGCACATGAATGTCGAAGGAATCCACGAATACCTTGAAGAATTGAAAAACGAGACGTTCTCAAAATACGACATCATGAC AGTCGGTGAAGCGAACGGTGTAACGCCTGAAGAAGCCGATCTTTGGGTCGGAGAAGAAAACGGTAAGATGAACATGGTCT TCCAGTTTGAACACATGGACCTGTGGCGGGCTGACGCGGAAAAAGGCGTCGACGTTGTCAAACTGAAACAAGTTTTGACG AAATGGCAAAAAGGACTTGAAGAAACAGGCTGGAACGCACTGTATCTTGAAAACCACGATAAGGTCCGCTCCGTCTCCCT TTGGGGTGATGAAGGACAATACTGGAAACAAAGCGCGAAGTCACTTGCGATGATGTATTTCTTCATGCAAGGAACACCGT TCATCTATCAAGGACAAGAAATCGGGATGACGAACGTCCAGTTCCCGGATATCTCCGACTACGATGATGTCGCGACGAAA AACATGTACAACATGCAACTGGCATCAGGGAAAACACATGAAGAGATCATGGAAGTCATCTGGAACTCGTCGCGTGATAA CTCCCGGACACCGATGCAGTGGACAAATGAACAAAACGGCGGTTTCTCGGAACAATCCCCATGGTTCGGTGTCAATCCGA ACTTTGCCGACATCAACGTGGCGGCGCAGCAAGCCGATGAGGATTCGATCCTGAACTTCTATAAACGGATGATTCAAATC CGGAAGATGGAAGAGACGTTGATTTACGGAGAATACGATCTCATTCTTCCGGAAGATACAAAAGTCTATGGTTACACGCG GACGCTCGGAAACGAACAGTTCCTGATTGTGACGAACCTGAAAGACGAAGTGGCGGAAGTCGACACCGACATCATCCTCC ATTCGGATAACATCATGCTTGCGAACTATGAGACAACGTATCATGAAGGAACCGAACTCACGCTTCAACCTTTTGAAGCA CGCCTGTACCGCGTACGTTAA Protein sequence : MTQMIPRPETAQKTLTRAWWKEAVAYQIYPRSFYDANNDGIGDIPGIIAKLDYLKDLGVDVLWICPMFKSPNDDNGYDIS DYEDIMDEFGTMADFDLLMEEAHKRDIKVLLDLVVNHTSDEHPWFLESRSSKDNDKRDWYIWKDAVNGGEPNNWESIFGG SAWEYDEKTEQYFLHVFSRRQPDLNWRNKDMRQAVYTMINWWLDKGVDGFRIDAISHINKDQSYADLPNPLGMPHVPSFE MHMNVEGIHEYLEELKNETFSKYDIMTVGEANGVTPEEADLWVGEENGKMNMVFQFEHMDLWRADAEKGVDVVKLKQVLT KWQKGLEETGWNALYLENHDKVRSVSLWGDEGQYWKQSAKSLAMMYFFMQGTPFIYQGQEIGMTNVQFPDISDYDDVATK NMYNMQLASGKTHEEIMEVIWNSSRDNSRTPMQWTNEQNGGFSEQSPWFGVNPNFADINVAAQQADEDSILNFYKRMIQI RKMEETLIYGEYDLILPEDTKVYGYTRTLGNEQFLIVTNLKDEVAEVDTDIILHSDNIMLANYETTYHEGTELTLQPFEA RLYRVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-119 | 48 |
