Gene Information

Name : Exig_2749 (Exig_2749)
Accession : YP_001815213.1
Strain : Exiguobacterium sibiricum 255-15
Genome accession: NC_010556
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2731880 - 2732623 bp
Length : 744 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bld:BLi03545 MntB

DNA sequence : 
ATGCTACATGCAGTAGAAGTCGACCAATTATCCGTCTCCTATTTCGAGACGACTGCACTTGAACGTCTGTCCGTCCGCTT
GACATCCGGTCAACTCATTGGAATCATTGGTCCGAATGGTGCCGGCAAATCGACTTTCATCAAAGCCATCATGGGATTGA
TTCCGGCAGAAGCGACTTCAATCCGTCTGCTTGGTCAATCCGCGAAACAGGCGCGGACACAGGTTGCTTACGTTCCCCAA
CGCAGTGCGATTGACTGGGATTTTCCGATTCGGGTCATCGATGCTGTCCTGATCGGCTGTTATCCGCAGCTCGGTTTGTT
CAAGCGGCCGACGAAACAGCACCGGATGCGGGCGCGCGCCTGTCTCGACCGGGTCGGAATGCTCGATTACGCCGACCGTC
AAATCGGTGAACTGTCCGGCGGTCAACAACAACGTGTCTTTTTGGCCCGCGCCTTAGCGCAGGAAGCCGACCTGTTATTA
CTCGACGAACCGTTCGTCGGGGTCGATGCCGGCAGTGAAGGAGTCATCATCGATTTATTGCGAGTGTTGCGCGATGAAGG
CAAGACGATCCTCGTCGTCCACCACGATTTAAGTAAAGCAGCCGACTATTTCGACACGTTGCTGCTTCTCAATCGACGGA
TCATTTCGGTCGGTCCGCCACAAGACGTCCTGCATGCTGATCTCATCGAAGCAGCTTACGGCAATCCGCTTGCCTTCCTG
CAGAAAGTGGAGGTTTCGTCATGA

Protein sequence : 
MLHAVEVDQLSVSYFETTALERLSVRLTSGQLIGIIGPNGAGKSTFIKAIMGLIPAEATSIRLLGQSAKQARTQVAYVPQ
RSAIDWDFPIRVIDAVLIGCYPQLGLFKRPTKQHRMRARACLDRVGMLDYADRQIGELSGGQQQRVFLARALAQEADLLL
LDEPFVGVDAGSEGVIIDLLRVLRDEGKTILVVHHDLSKAADYFDTLLLLNRRIISVGPPQDVLHADLIEAAYGNPLAFL
QKVEVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 5e-41 44
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 4e-41 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-38 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-38 44
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-38 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-39 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Exig_2749 YP_001815213.1 ABC transporter BAC0400 Protein 8e-52 53
Exig_2749 YP_001815213.1 ABC transporter BAC0350 Protein 5e-39 44
Exig_2749 YP_001815213.1 ABC transporter BAC0440 Protein 1e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Exig_2749 YP_001815213.1 ABC transporter VFG0526 Protein 4e-39 44