Gene Information

Name : Exig_2624 (Exig_2624)
Accession : YP_001815089.1
Strain : Exiguobacterium sibiricum 255-15
Genome accession: NC_010556
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 2601900 - 2603066 bp
Length : 1167 bp
Strand : -
Note : KEGG: vpa:VP0236 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP

DNA sequence : 
ATGAAAATAACAGTAGCAGGAACGGGATACGTTGGTCTTTCTATGGCGGTTTTGCTCGCACAACATAATGAAGTCACATC
GATTGATATCATTAAAGAACGTGTCGAGCTCGTCAATGATCGGAAATCACCAATCGTTGATGCTGAGATTGAAAACTTTT
TACAAAACAAAGAATTGAACTTGCATGCGACAACTGACAATTTTGAAGCATACAAAGATGCTGAATTCGTCATTATTGCT
ACTCCGACGGATTATGATCCAACACGGAACTACTTTAATACTCGTACTGTTGAAAGCGTCATTGCGACAGTTCTTGCTAT
CAATCCGGATGCGACGATGGTCATTAAATCGACGGTACCGGTTGGCTACACACAAGAGTTAAAAGAGAAGTTCGATACAC
CAAACATTATCTTCTCACCGGAGTTCTTGCGTGAAGGTCAGGCATTACATGACAACCTCTATCCATCACGTATCGTCGTC
GGTGAACAGTCGGAACGCGCGCAACAATTCGCTGATCTTTTACTTGAAGGTGCCATTAAGAAAGACGTGCCGATTCTTTT
GACAGATTCAACCGAAGCTGAAGCAATCAAGTTATTCTCCAATACGTATCTTGCGATGCGTGTCGCATTCTTTAATGAGC
TCGATACGTATGCGGAAGTCCGTAATCTTGATACAAAACAAATCATTGAAGGTGTCGGGCTTGATAGCCGAATCGGTAAC
CACTACAACAATCCATCGTTTGGATACGGAGGTTACTGCTTACCGAAAGATACGAAGCAGCTGCTTGCGAACTATGATGA
AGTACCAAATAACATCATCGGGGCAATTGTTGAAGCGAACCGGACACGCAAAGACTACATTGCCGATACGATCATCAAAC
AGAATCCGAAAGTCGTTGGGGTGTATCGTTTAACGATGAAAACAGATTCGGATAACTTCCGGGCCTCTTCGATTCAAGGA
ATTATGAAGAGAATCAAGGCGAAGGGAATTGAAGTAACAGTTTTTGAACCGGTCTTGACGGAAGATACATTCTATAACTC
ACGCGTCATTCGTGATCTTGAAGCGTTTAAGCAAGAGTCGGATATTATTCTTTCGAACCGGATGCATTCTGAGTTGAGTG
ATGTTGAGGATAAAGTTTATACGCGTGATCTGTACAGTCGCGACTAA

Protein sequence : 
MKITVAGTGYVGLSMAVLLAQHNEVTSIDIIKERVELVNDRKSPIVDAEIENFLQNKELNLHATTDNFEAYKDAEFVIIA
TPTDYDPTRNYFNTRTVESVIATVLAINPDATMVIKSTVPVGYTQELKEKFDTPNIIFSPEFLREGQALHDNLYPSRIVV
GEQSERAQQFADLLLEGAIKKDVPILLTDSTEAEAIKLFSNTYLAMRVAFFNELDTYAEVRNLDTKQIIEGVGLDSRIGN
HYNNPSFGYGGYCLPKDTKQLLANYDEVPNNIIGAIVEANRTRKDYIADTIIKQNPKVVGVYRLTMKTDSDNFRASSIQG
IMKRIKAKGIEVTVFEPVLTEDTFYNSRVIRDLEAFKQESDIILSNRMHSELSDVEDKVYTRDLYSRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 4e-96 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Exig_2624 YP_001815089.1 nucleotide sugar dehydrogenase VFG0963 Protein 4e-103 55