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Name : Exig_2574 (Exig_2574) Accession : YP_001815040.1 Strain : Exiguobacterium sibiricum 255-15 Genome accession: NC_010556 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2549483 - 2551354 bp Length : 1872 bp Strand : - Note : PFAM: UBA/THIF-type NAD/FAD binding protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male ster DNA sequence : ATGCAAGCCCCGCCATTCCAGCAATATCGCCGGCATATGAAGATCGGTCTATTGCGACTGATCGATGCCTCGATCATCAT TGCTGCGACGGTCGTGACCTTTTACTTTTTTAATCCGCTGAACCTCACGGCCAACTTTGAACTGATGGATGCTATCGAAA TCGCTTTGATTCAATGGGTCGCCTTGACACTCGTCGCCCACTGGATGCGTTTTTACCAAATCATCTGGCGGTATGCCAGC CTGCGTGATTTAGGCGTACTGCTCGTCGTCGTTGTTGCGAGCAGCTTCGTTCTTCTCGGACTCGAGTACGCTCTGTTCGA TTTTGCCGTCGAGCGTGCCGTCTTCCTTCAGACCGGTTTAGTCCTGAATGGCATCTTGTTCGTCCGACTGTTGATCCGCG GACGAAGTCTCGAGCTGAAACGGGAAAACCGGACGCTCGGGAAACGGACGTTAATCATCGGTGCCGGTGCCTCGGGGCAG ATGATCACAAAAGAGCTGAAACAGAAAAAAGCCCATATTCTGAACGTCGTCGGGTTGCTCGATGACTTGACGGAACTGAA AGGAATGATGATTCACGGTGTCCCCGTCATCGGAACGATTGATCAACTCGAATGTATCATTGAAGAACATAAAATTGAAG CTGTCGTCCTGGCCATTCCGTCACTTGCCTATCCGGACCGGGTTGCTTTACTGAACCGGATCAAACAGACGAAAGTCGAA GCCCATACATTACCGATGCTTGTCGAACTGGCTTCCGGCAAGGTCTCCGTCAATCAGATGCGCGAAGTATCAATCGCTGA CCTGCTCGGCCGGGAACCGGTTGAACTGGATATCACGGAGATTGAAAAGAGTGTCAGTCAAGCAACGGTGCTCGTTACCG GAGCCGGGGGATCAATCGGCTCCGAGATTTGCCGACAGCTGATTAAGTTCAAACCGGATCATCTGATTTTACTCGGTCAC GGCGAAAACAGCATTTATCTGATCCGACGTGAACTGGAAGCCGTCACAGAAGGAATCACGCTCCATTCCGTCATCGCCGA TGTCCAGGATGCGGACCGGATGATGGATGTGATGGAACGGTTTAAACCGGATCTCGTCTACCACGCGGCAGCACACAAAC ATGTGCCGTTGATGGAAGACAATCCAAGCGAAGCAGTCAAAAATAACATCTACGGGACGCGGAATGTCGCTCTTGCGGCA GAAGCGGCCGGAGTCAACCGATTCGTCATGATTTCAACCGATAAGGCGGTCAATCCGACCAGTGTGATGGGAGCGACGAA ACGAATTGCCGAGATGGTCATCCAGCAGATTGCCCGCAACAGTGAGACGACGTTCGCTGTCGTCCGGTTCGGCAACGTGT TAGGGAGCAGGGGTTCCGTCATCCCGCTCTTTAAGGACCAGATTGCGAAAGGCGGTCCGATTACGGTGACGGACCCGGCC ATGACGCGGTATTTCATGACGATTCCGGAAGCGAGCCGGCTCGTCATTCAAGCGAGTGTCCTCGCGGAAGGGGGAGAAGT CTTCGTCCTCGACATGGGCGAACCCGTCAACATCACGACGCTCGCCCGGAACCTGATTCATTTAAGCGGCTTTACCGAAC AACAGATTCCAATCGTCTACAGCGGCATCCGAAAAGGTGAAAAGTTATACGAAGAGTTGCTCGCGACGGAAGAAGTACAT GAAGAACGGGTCTTTGACAAGATTCTTGTCGGGAAAACACGACCGTTCGGATCCATTGATCCTTATTTACGGAACATCGC CTTGACGCTGGATGATGAACAGGCGTTACGGATGTATTTACTTGAAGCGACGAACCGGACCGACATGATGCCGGAGACGA TTCCACCGGCGATTCGGATCGCCCGCGAATGA Protein sequence : MQAPPFQQYRRHMKIGLLRLIDASIIIAATVVTFYFFNPLNLTANFELMDAIEIALIQWVALTLVAHWMRFYQIIWRYAS LRDLGVLLVVVVASSFVLLGLEYALFDFAVERAVFLQTGLVLNGILFVRLLIRGRSLELKRENRTLGKRTLIIGAGASGQ MITKELKQKKAHILNVVGLLDDLTELKGMMIHGVPVIGTIDQLECIIEEHKIEAVVLAIPSLAYPDRVALLNRIKQTKVE AHTLPMLVELASGKVSVNQMREVSIADLLGREPVELDITEIEKSVSQATVLVTGAGGSIGSEICRQLIKFKPDHLILLGH GENSIYLIRRELEAVTEGITLHSVIADVQDADRMMDVMERFKPDLVYHAAAHKHVPLMEDNPSEAVKNNIYGTRNVALAA EAAGVNRFVMISTDKAVNPTSVMGATKRIAEMVIQQIARNSETTFAVVRFGNVLGSRGSVIPLFKDQIAKGGPITVTDPA MTRYFMTIPEASRLVIQASVLAEGGEVFVLDMGEPVNITTLARNLIHLSGFTEQQIPIVYSGIRKGEKLYEELLATEEVH EERVFDKILVGKTRPFGSIDPYLRNIALTLDDEQALRMYLLEATNRTDMMPETIPPAIRIARE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-101 | 55 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-99 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Exig_2574 | YP_001815040.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 1e-70 | 42 |
