Gene Information

Name : Exig_2327 (Exig_2327)
Accession : YP_001814795.1
Strain : Exiguobacterium sibiricum 255-15
Genome accession: NC_010556
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3666
EC number : -
Position : 2293355 - 2294938 bp
Length : 1584 bp
Strand : +
Note : PFAM: transposase IS4 family protein; KEGG: bha:BH0682 cassette chromosome recombinase B1

DNA sequence :
ATGTTTAAAAATTATACCATGAACCAGCTGGTTCTACCTTTAGATTTAGAAATTCGTCTTCAAGAAAACGATATCGCATT
CGCCGTTCATCATCTTGTCGAGTCCATTCCCGACGATGCCTTTGAACCTTTTACTCGAACGACAGGCTGCCCCGCCTATC
ATCCACGCATGATGATGAAGATCATTTTATGCGCCTATACGCAATCGGTCTTCTCTGGTCGGAAGATCGAAGGACTCCTT
CAAGACAGCCTGCGTATGATGTGGCTCGCTCAAGGGAATGAACCGAGCTATCGTACTATCAATCGCTTTCGAGTGCACCC
GGCAGTCACACCTATCCTTAAGCAGGCGTTCGTCACCTTCCGTTGCCATCTCGTCGAGATGGGAGAAATTAAGGAAGAAG
CGATCTTCATTGATGGTACGAAACTAGAAGCGAATGCGAATCGATATACGTTCGTCTGGCGAAAATCCGTCGAGCGATAT
AGTGCGTCGCTCGTTGAAAAGTCTAATCTTCTCTATGAAGAACTCGTCGCACAAGAAATCTTACCGGAGATTGAACGAGA
AAGTCCAGACGAACTGACCCTTCCTGAACTCGAGCACATCGGTGATGTTTTGGAGGGACGAATCGCTTCTATCAATCAAG
AAATCGAGGCAAGTTCAGATACGCAGGAGAGAAAACGGCTTCGTTCCGAACGAAAGCAACCCCATCTTTTCCGAAAAAAG
TTCGCTGAGTTCGTGGAAAGAAAAAGGAAGTATGCCGTCCAAAAGGAAACGTTCGATGGACGGAACAGCTATTCGAAAAC
GGATACGGATGCGACGTTTATGCGGATGAAGGAAGATCATATGCAAAATGGACAACTCAAGCCGGGGTACAACGTGCAGA
TTGCGACCGAAGGTCAATATACCCTCGCTTATGATGTCTATCCCAATCCGACCGATGCCCGCACGTTAATCCCATTTTTA
GATGAGGTTTCCTCGTATCTTACTTTACCGAAACATATCGTTGCGGACGCCGGCTATGGAAGCCAAGAAAATTATCAGGA
GATTCTGATGCGCCGAGGGCGCATTCCGCTCGTTCCCTATACGATGTTTCAAAAAGAGAAGACGCGAAAATGGCGTGATG
ATCCTTTTAATCTCGTCAACTGGTCCTACGATGAAACGACCGATCACTTTGTATGCCCGAACGGGCAGAACGTGACGTTC
CGTTACATGTCTAAGAGAACGGATCGATATGGTTTTACCCGCGATTTCAAGGTGTACGAAAGTGAGAGTTGTGATGACTG
CCCGCTTCGATCCCTCTGTACCAAGGCAGAGAAGGGTCGTCATCGCCAAGTCCGAGTAAACGTTTCGTGGGAAGAGCAAA
AGGAACAGGTAAAGGACCTGCTTTCAGATCAAAAAACCGGGAAAATCTACGCGAAACGTAAGATAGACGTAGAACCAGTT
TTTGGGAATCTGAAGGCTAATTTGCGTTTCACTCGTTTTTCCGTAAGAGGAAAAGCAAAGGTGAAACGTGAGCTTGGCTT
CATCCTTATGGCAGTAAATCTGAGAAAGTGGCTCACCCAAAGTATTGCCCGAGGGGCATTTTAA

Protein sequence :
MFKNYTMNQLVLPLDLEIRLQENDIAFAVHHLVESIPDDAFEPFTRTTGCPAYHPRMMMKIILCAYTQSVFSGRKIEGLL
QDSLRMMWLAQGNEPSYRTINRFRVHPAVTPILKQAFVTFRCHLVEMGEIKEEAIFIDGTKLEANANRYTFVWRKSVERY
SASLVEKSNLLYEELVAQEILPEIERESPDELTLPELEHIGDVLEGRIASINQEIEASSDTQERKRLRSERKQPHLFRKK
FAEFVERKRKYAVQKETFDGRNSYSKTDTDATFMRMKEDHMQNGQLKPGYNVQIATEGQYTLAYDVYPNPTDARTLIPFL
DEVSSYLTLPKHIVADAGYGSQENYQEILMRRGRIPLVPYTMFQKEKTRKWRDDPFNLVNWSYDETTDHFVCPNGQNVTF
RYMSKRTDRYGFTRDFKVYESESCDDCPLRSLCTKAEKGRHRQVRVNVSWEEQKEQVKDLLSDQKTGKIYAKRKIDVEPV
FGNLKANLRFTRFSVRGKAKVKRELGFILMAVNLRKWLTQSIARGAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC67565.1 hypothetical protein Not tested Type-IVc SCCmec Protein 1e-99 53
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 4e-120 53
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 7e-118 53
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 5e-120 53
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 5e-120 53
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 5e-120 53
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 5e-114 52
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 8e-130 50