Gene Information

Name : Exig_0010 (Exig_0010)
Accession : YP_001812515.1
Strain : Exiguobacterium sibiricum 255-15
Genome accession: NC_010556
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 18784 - 19674 bp
Length : 891 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGATGGAACGGCAACAAGGATCAGATCGTGTCAAACGGGGAATGGCTGAAATGCAAAAGGGTGGCGTCATCATGGATGT
CGTGAATGCGGAACAGGCTAAAATCGCAGAAGCCGCCGGAGCGGTCGCTGTCATGGCACTTGAACGGGTGCCATCGGATA
TTCGGCGTGACGGGGGAGTAGCCCGGATGGCCGATCCGCTCATCACGGAAGAGGTTCTGCAGGCAGTATCCATTCCCGTG
ATGGCGAAGTGCCGGATCGGACATATCGTCGAAGCACGGGTCCTCGAATCGTTGGGTGTTGACTTTATTGATGAAAGTGA
AGTCCTGACGCCGGCAGACGAGGAGTATCATTTATTGAAGTCATCGTTTACAGTACCGTTCGTCTGCGGAGCACGTGATT
TAGGAGAAGCGGCGCGCCGGATTGCAGAAGGAGCAGCGATGATCCGGACAAAAGGGGAACCCGGAACCGGCAATGTCGTC
GAAGCTGTCCGGCATATGCGCAAGATTCAAGCACAACTCCACCAGATTCTTCATTCACAACCGGATGAATTGATGACGCG
TGCTAAAGAGTGGGGCGCATCTTACGAGGTCTTACAACAGATTCAGACAACAGGACGTCTTCCGGTCGTGAATTTTGCGG
CTGGCGGAATCGCGACTCCAGCCGATGCGGCATTGATGATGCACCTTGGAGCCGAAGGCGTATTTGTCGGTTCCGGTATC
TTTAAATCGGAACATCCGGAACGCGTCGCGAAAGCGATTGTCGAAGCCGTGACATACAAAGACGATTTCGAACGGATTGC
CCATCTGTCGAAAGGACTCGGAACAGCGATGAAAGGAATTGATGTGACGTCGATGCCGTTTGAAGAACGGATGGCACCAC
GCGGATGGTAA

Protein sequence :
MMERQQGSDRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPSDIRRDGGVARMADPLITEEVLQAVSIPV
MAKCRIGHIVEARVLESLGVDFIDESEVLTPADEEYHLLKSSFTVPFVCGARDLGEAARRIAEGAAMIRTKGEPGTGNVV
EAVRHMRKIQAQLHQILHSQPDELMTRAKEWGASYEVLQQIQTTGRLPVVNFAAGGIATPADAALMMHLGAEGVFVGSGI
FKSEHPERVAKAIVEAVTYKDDFERIAHLSKGLGTAMKGIDVTSMPFEERMAPRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-61 63
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-61 63
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-61 63