|
Name : Exig_1183 (Exig_1183) Accession : YP_001813679.1 Strain : Exiguobacterium sibiricum 255-15 Genome accession: NC_010556 Putative virulence/resistance : Unknown Product : transposase IS4 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 1226707 - 1228290 bp Length : 1584 bp Strand : + Note : PFAM: transposase IS4 family protein; KEGG: bha:BH0682 cassette chromosome recombinase B1 DNA sequence : ATGTTTAAAAATTATACCATGAACCAGCTGGTTCTACCTTTAGATTTAGAAATTCGTCTTCAAGAAAACGATATCGCATT CGCCGTTCATCATCTTGTCGAGTCCATTCCCGACGATGCCTTTGAACCTTTTACTCGAACGACAGGCTGCCCCGCCTATC ATCCACGCATGATGATGAAGATCATTTTATGCGCCTATACGCAATCGGTCTTCTCTGGTCGGAAGATCGAAGGACTCCTT CAAGACAGCCTGCGTATGATGTGGCTCGCTCAAGGGAATGAACCGAGCTATCGTACTATCAATCGCTTTCGAGTGCACCC GGCAGTCACACCTATCCTTAAGCAGGCGTTCGTCACCTTCCGTTGCCATCTCGTCGAGATGGGAGAAATTAAGGAAGAAG CGATCTTCATTGATGGTACGAAACTAGAAGCGAATGCGAATCGATATACGTTCGTCTGGCGAAAATCCGTCGAGCGATAT AGTGCGTCGCTCGTTGAAAAGTCTAATCTTCTCTATGAAGAACTCGTCGCACAAGAAATCTTACCGGAGATTGAACGAGA AAGTCCAGACGAACTGACCCTTCCTGAACTCGAGCACATCGGTGATGTTTTGGAGGGACGAATCGCTTCTATCAATCAAG AAATCGAGGCAAGTTCAGATACGCAGGAGAGAAAACGGCTTCGTTCCGAACGAAAGCAACCCCATCTTTTCCGAAAAAAG TTCGCTGAGTTCGTGGAAAGAAAAAGGAAGTATGCCGTCCAAAAGGAAACGTTCGATGGACGGAACAGCTATTCGAAAAC GGATACGGATGCGACGTTTATGCGGATGAAGGAAGATCATATGCAAAATGGACAACTCAAGCCGGGGTACAACGTGCAGA TTGCGACCGAAGGTCAATATACCCTCGCTTATGATGTCTATCCCAATCCGACCGATGCCCGCACGTTAATCCCATTTTTA GATGAGGTTTCCTCGTATCTTACTTTACCGAAACATATCGTTGCGGACGCCGGCTATGGAAGCCAAGAAAATTATCAGGA GATTCTGATGCGCCGAGGGCGCATTCCGCTCGTTCCCTATACGATGTTTCAAAAAGAGAAGACGCGAAAATGGCGTGATG ATCCTTTTAATCTCGTCAACTGGTCCTACGATGAAACGACCGATCACTTTGTATGCCCGAACGGGCAGAACGTGACGTTC CGTTACATGTCTAAGAGAACGGATCGATATGGTTTTACCCGCGATTTCAAGGTGTACGAAAGTGAGAGTTGTGATGACTG CCCGCTTCGATCCCTCTGTACCAAGGCAGAGAAGGGTCGTCATCGCCAAGTCCGAGTAAACGTTTCGTGGGAAGAGCAAA AGGAACAGGTAAAGGACCTGCTTTCAGATCAAAAAACCGGGAAAATCTACGCGAAACGTAAGATAGACGTAGAACCAGTT TTTGGGAATCTGAAGGCTAATTTGCGTTTCACTCGTTTTTCCGTAAGAGGAAAAGCAAAGGTGAAACGTGAGCTTGGCTT CATCCTTATGGCAGTAAATCTGAGAAAGTGGCTCACCCAAAGTATTGCCCGAGGGGCATTTTAA Protein sequence : MFKNYTMNQLVLPLDLEIRLQENDIAFAVHHLVESIPDDAFEPFTRTTGCPAYHPRMMMKIILCAYTQSVFSGRKIEGLL QDSLRMMWLAQGNEPSYRTINRFRVHPAVTPILKQAFVTFRCHLVEMGEIKEEAIFIDGTKLEANANRYTFVWRKSVERY SASLVEKSNLLYEELVAQEILPEIERESPDELTLPELEHIGDVLEGRIASINQEIEASSDTQERKRLRSERKQPHLFRKK FAEFVERKRKYAVQKETFDGRNSYSKTDTDATFMRMKEDHMQNGQLKPGYNVQIATEGQYTLAYDVYPNPTDARTLIPFL DEVSSYLTLPKHIVADAGYGSQENYQEILMRRGRIPLVPYTMFQKEKTRKWRDDPFNLVNWSYDETTDHFVCPNGQNVTF RYMSKRTDRYGFTRDFKVYESESCDDCPLRSLCTKAEKGRHRQVRVNVSWEEQKEQVKDLLSDQKTGKIYAKRKIDVEPV FGNLKANLRFTRFSVRGKAKVKRELGFILMAVNLRKWLTQSIARGAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 1e-99 | 53 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 7e-118 | 53 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 5e-120 | 53 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 5e-120 | 53 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 5e-120 | 53 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 4e-120 | 53 |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 5e-114 | 52 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 8e-130 | 50 |
