|
Name : Exig_1044 (Exig_1044) Accession : YP_001813541.1 Strain : Exiguobacterium sibiricum 255-15 Genome accession: NC_010556 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1092054 - 1094585 bp Length : 2532 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGAAGCAGTCCATAACACACCGATGATGAAACAATATTTTTCGATTAAGGCCGACTATCCGGATGCCTTTTTGTTTTA TCGGTTAGGTGATTTTTACGAATTATTTTTTGAAGATGCCAAACAAGTGGCGCATGAACTGGAATTGACGCTGACAGCGA AAAACGGCAAGAATGCCGAACACCCGATTCCGATGTGCGGTGTACCGCACCATGCCGCAAACGGCTATATCGAACAATTG ATCGAACGCGGTTATAAGGTGGCTTTATGTGATCAGGTCGAAGATCCGAAGCTGACGAAAGGTCTCGTTAAACGAGAAGT CGTCCAAGTCATTACACCGGGAACGCTGATGTCCTCGTTGACGGAAAAAGAAAACCGGTATCTCGTCGCCGTCGTCGAAC AGGACGGACGATTCGGGATTGCCCGGGGCGACGTTTCGACCGGTGAAAGTGCCTTGACGAGTGTTGCGACACTTGATGCC GTGGCAAAAGAATTGAGTATCATCCTGCCGCGTGAAATTGTCGTCACGTCAAGTGAACACGAGGCGGCACTCAGCCACTT GCAGATTCCGTTGACACAAAGTACGCGCCGGGAAACCCATCCGCACGGCGACAGGGCGATTGATGCGGCACAAGCAGATG CCTTTGCTGTGCTCTATGCCTACATGCATGATACGCAAAAACGGTCGCTTGCCCATCTGCAACCGGCCATCGTTTACGAA GCGGCCGACTTCATGCAGCTCGAACCGAATACGGTCAAAAATCTGGAGCTGGTCCGGTCTGCCCGGACCGGTGATAAAAA GGGCTCGTTACTGGGACTGCTGGACGTCACCGGTACGGCAATGGGCGGACGGATGCTGAAGCGCTGGCTCGAAAAACCGT TGCTGTCACAACATACGATTGCCGAGCGGCTGGATGCCGTCGAAGAACTGCTGGCTCATTATTTCGAGCGTCAACAGTTG AAGGATACATTGCGCGAAGTCTATGACTTGGAACGATTGGTCGCAAAAGTCGGATACGGGACGGCTTCCGCCCGCGATCT CGTCCAGTTGAAGTCAACGCTGCGTCTGATTCCGCGGATTCAAGCGGCACTGGAAGAATTATTCAGTGACCGGCTCGGAC AGCTGGCACTTGGACTTGATCCGCACGATGAATTAACCGATCTGCTCGACCGTGCTTTTGTCGAGGCTCCACCGATTTCG ACGAAAGATGGCGGAATGATCCGGACCGGATTTGATCCGGCGCTCGACGAATTACTGGTGGCGTCAAAAGACGGGAAGAC GTGGCTGGCAACGCTTGAAGCCAGTGAACGGCAAGCGACGGGGATTAAGACGTTGAAAATCGGCTACAACCGGGTCTTCG GTTATTACATCGAAGTATCGCGGGCCAATGCCAAACTGTTGCCGGAAGGGCGTTACGAACGGAAACAGACACTTGCGAAT GCGGAACGGTATGTGACGCCGGAACTGAAAGAGAAGGAAGCACTGATTCTCGGAGCTGAGGAAAAAAGTATTACGCTGGA ATACGAACTGTTTTGTCAGGTCCGCGATCAGGTGAAGACACACATCGAAAGTCTGCAACGGGTCAGCCGGCGGATTGCCG AACTTGATGTTCTCGTCGCTTTGGCGGAAACCGCTGAACGGCATGATTACGTCCGACCGGTGACCTTGACGGGTCGGAAT GTAATGATTGAAAACGGGCGACATCCGGTCATCGAGACGGTATTGCCACGCGGGGAGTATGTTGCGAACGGCATCAATCT GAATGAAGACCGGGAAATGCTGTTAATCACAGGACCGAACATGTCCGGTAAATCGACGTATATGCGCCAGTTTGCTTTGA TTGCCTTATTGCATCAAATCGGATCGTTTGTCCCGGCAAGCCGGGCCGAGTTACCGATCTTTGATCAGATTTTCACCCGG ATCGGAGCAGCGGACGATTTAGTCAGCGGTCAATCGACCTTCATGGTCGAGATGGTCGAGACGCAGGAAGCGTTGACACG GGCAACGGACCGTTCGTTGATTCTCCTCGACGAAATTGGTCGCGGGACATCGACGTATGACGGGATGGCGCTCGCACAGG CCATCGTCGAGCACATCGCGGAGCACGTCGGGGCGAAGACTCTGTTCTCGACCCATTATCATGAGTTGACGGTCCTTGAG GACTCGATGCCGCGTCTCGCGAATGTCCATGTCCGGGCTGTCGAACAGGATGGACGGGTCGTCTTCTTACATGAAGTAAG GGACGGGAAAGCCGATCAATCATACGGAATCCACGTTGCCCGTCTGGCTGATTTACCGGATGCCCTGATTGCCCGGGCGG AAGTCCTGTTATCGGAATTCGAGCAAACAGAGGAACGGACCGTCGTATCACCGAAAGAGCCGGTCGTTCAGGCGGAACCG GTTGATCAACTCAGTCTCTTTGCGGAGACGGACCCGGTCCGGGAAACGGTCCAGACACTGGATTTAATCAATATGACACC ACTTGAAGCATTAAACACGCTCTACCGTCTGCAGGCGGAAGCGAGAAAATAA Protein sequence : MEAVHNTPMMKQYFSIKADYPDAFLFYRLGDFYELFFEDAKQVAHELELTLTAKNGKNAEHPIPMCGVPHHAANGYIEQL IERGYKVALCDQVEDPKLTKGLVKREVVQVITPGTLMSSLTEKENRYLVAVVEQDGRFGIARGDVSTGESALTSVATLDA VAKELSIILPREIVVTSSEHEAALSHLQIPLTQSTRRETHPHGDRAIDAAQADAFAVLYAYMHDTQKRSLAHLQPAIVYE AADFMQLEPNTVKNLELVRSARTGDKKGSLLGLLDVTGTAMGGRMLKRWLEKPLLSQHTIAERLDAVEELLAHYFERQQL KDTLREVYDLERLVAKVGYGTASARDLVQLKSTLRLIPRIQAALEELFSDRLGQLALGLDPHDELTDLLDRAFVEAPPIS TKDGGMIRTGFDPALDELLVASKDGKTWLATLEASERQATGIKTLKIGYNRVFGYYIEVSRANAKLLPEGRYERKQTLAN AERYVTPELKEKEALILGAEEKSITLEYELFCQVRDQVKTHIESLQRVSRRIAELDVLVALAETAERHDYVRPVTLTGRN VMIENGRHPVIETVLPRGEYVANGINLNEDREMLLITGPNMSGKSTYMRQFALIALLHQIGSFVPASRAELPIFDQIFTR IGAADDLVSGQSTFMVEMVETQEALTRATDRSLILLDEIGRGTSTYDGMALAQAIVEHIAEHVGAKTLFSTHYHELTVLE DSMPRLANVHVRAVEQDGRVVFLHEVRDGKADQSYGIHVARLADLPDALIARAEVLLSEFEQTEERTVVSPKEPVVQAEP VDQLSLFAETDPVRETVQTLDLINMTPLEALNTLYRLQAEARK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 2e-94 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Exig_1044 | YP_001813541.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 1e-110 | 45 |
