Gene Information

Name : Exig_1001 (Exig_1001)
Accession : YP_001813498.1
Strain : Exiguobacterium sibiricum 255-15
Genome accession: NC_010556
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1048565 - 1049449 bp
Length : 885 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bcz:BCZK3846 site-specific tyrosine recombinase XerD

DNA sequence :
GTGAGGCAACAACTGGAGACTTTTATCGACTATTTAGTGATTGAGCGGCAGATGTCGGCGAACACGGCAGCTGCCTATCG
AAATGATTTAAACCAGTATTTGACGACGCTTGAACAGCAGGGGATTTCGTCCGCGGAAGAAGTCACACGCCACCACATCG
TCCTTCATATTGAATCCCTGTTACAGGCACAAAAATCACGAGCGACGGTCCGGCGGTCGACGAGCTCGATCCGATCGTTC
CATCAGTTTTTAGTGGAACGTCAAATCGTCCGGCATGATCCGTCACGTCATCTTGACTTGCCGAAACCGGATAAAAAACT
GCCGGTGGTTTGGAGTCAAACCGATATCGTCCGTCTGCTTGATTCGGTCGTCGGCAATGATCCGCTCGTCCGGCGGGATG
CAGCGATGCTTGAATTGCTGTACGGAACCGGTATGCGTGTCAGTGAATTGTTACAACTGACGCTGAGTGATTTGCAACTT
GAACTCGGTTACTTGTCCTGTCTTGGAAAGGGTAACAAAACCCGGATTATTCCGATCAGTCAGACGGCGATCGACAGCGT
CTCGGTTTATCTTGAGCTGGCCCGGAACAGTCTCGGAGGACGGCAAACGGATTATGTGTTCCTCAACAGTCGCGGCGATC
GGTTATCGCGTCAGGGTTTCTGGAAGATGATCAAACGCCGGGCGAAAGAAGCGGGAATTGAAAAAGACATCACGCCCCAC
GTCTTGCGTCATTCGTTTGCGACCCACCTTCTCGAGAACGGAGCCGATTTACGTGTCGTTCAGGAAATGTTGGGACATGC
CGATTTATCGACGACGCAAATGTATACCCATGTCAATAAAGCCAGATTACATGATGTCTATAAGAACCATCATCCACGTG
CGTGA

Protein sequence :
MRQQLETFIDYLVIERQMSANTAAAYRNDLNQYLTTLEQQGISSAEEVTRHHIVLHIESLLQAQKSRATVRRSTSSIRSF
HQFLVERQIVRHDPSRHLDLPKPDKKLPVVWSQTDIVRLLDSVVGNDPLVRRDAAMLELLYGTGMRVSELLQLTLSDLQL
ELGYLSCLGKGNKTRIIPISQTAIDSVSVYLELARNSLGGRQTDYVFLNSRGDRLSRQGFWKMIKRRAKEAGIEKDITPH
VLRHSFATHLLENGADLRVVQEMLGHADLSTTQMYTHVNKARLHDVYKNHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-43 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-43 42