Gene Information

Name : PMI0299 (PMI0299)
Accession : YP_002150078.1
Strain : Proteus mirabilis HI4320
Genome accession: NC_010554
Putative virulence/resistance : Virulence
Product : fimbrial outer membrane usher protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3188
EC number : -
Position : 354349 - 356877 bp
Length : 2529 bp
Strand : +
Note : -

DNA sequence : 
ATGGGGATGGTGAATAGTATGATATTTGAACTCAATCAGTTAAGGCAAGTCGTATTATTGACAATGAGTATTAGTGTGTT
TTCTGCTTATGCTACAGAATTCAATATCGATGTGTTAGATGCAGAAGATATACAAAATATCGATATGAGCCAATTTTCCA
TTGCTGGCTATGTTCCCCCTGGTGATTATGTATTAACAGTTTTTGTTAATGGACAACGTTTAGGCGCACCTCGCGATATC
ACGGTTTTAGAGCAAAAAACGCAAACACAAGCTATCTGTATACCTGCTGACTTACTTGATTCTATTGGTTTAAAAGAGTC
TGTAAAACCAAAAGTGACTGTATACCCTAATAGTCAATGCCTTGATCTTTCTGTTTTGAAAGGAATGCAAACAGTTATTG
ATCTCCCAACACTATCACTCAAAATAACGATCCCCCAATTATGGATGGAATATAGAGATCCTTATTGGACTCCTCCTGCA
TTATGGGAAGAAGGAATTAATGGTGCTTTCCTTGATTACAGCGCTAATGTTTCAATCACCGAAGAAAAAGAGGGGGATAA
ACGTACTTATTTGTCCACTAATGGTACTGCGGGTATTAATTTAGGTGTTTGGCGCTTTCGTGGTGATTATAGTGCCATCT
ATCAAAAAAAGCGGGGTGGCAGACAATCACAAGAAATACACGATTTTGATTTTAGCCGTCTTTATGGTTTTACCTCCTTG
AAAAAATTGGCTTCAATTTTAACTATTGGAGAAAATTATTTTTACTCAGATGTTTTTGAATCATGGCAATACAGCGGTAT
TTCATTAGAAAGTGATGATCGCATGCTACCTCCCAAATTAGTGGGGTATGCACCAGAGATCACAGGTGTAGCAGATACCA
ATGCAACAGTGATTGTTCGTAGCCAAAATCGAGTGCTCCTTGAAACAACAGTACCCCCTGGACCATTTCGTATTCAAACT
TTAGATAGTGGTGTTCGAGGGATACTCGATATCACAATCCGTGAAGAAAATGGAGAAGAGAAAAAATTTAGTATCAGTAC
TGCCTCATTACCTTATTTAACTCGCCCTGGCCGTCTGATCTATAAATTAGTGATGGGTAAAACTCGTTATGATGGACATC
ATTTAACAGGTAAACCCGTATTCAGTGGTGAATTCTCCTATGGTCTATCTAATGCTTGGTCGTTATATGGGGGAACACAA
TTTAACAGCGATTATCAGGCAACGGCGATTGGTATAGGACGGGATCTATTTTCTTTTGGGGCATTATCACTTGATATTAC
TCAGTCTTTTGCACGTTTTACTGATAAAAAAATAAAAGGGCGTTCTTATCGTCTTAATTATGCAAAATCTTTTGATGCAC
TACGCACGGATATTACTTTTGCTGGGTATCGATTTGCTGCTAGAGATTATCGCACATTAACTCAGTTTATGGATCAACGT
CGTACTGGTTATGATATTCGCTCTCCAAAAGAGAACTATCAAATTTATATAAACAAGTATTTTGATAATTTTAATATATC
ACTAAATTATCAATATAGTACCTATTGGCAAGATAAACCTCAAACACAATATGGTTTATACGCAAGTACTAATATCAGTA
TTCCAATGTTATCTCAGCAAAATGCGAATATATCTTTATCAGCAACCAGAACTGAACGAGATAGTGGTTATCAAGATGAT
GCTATTAATCTGTATTTAACAATACCATTATATAAAGGCCATAGCATTTCATTTTCTGAATCATATTCTCGTATTGGTAA
AAGTAATCAATATAGCCATAGAGCAAGTTATAGTGGTTATAGTGATCGCGATAATTATAGTCTGAATGTGGGCTATAGTC
ATGGAGAAGAAATTGATAGCCAATCAAGTATCAGTGGTTATTATTCTCGCGACTTTTCTCAAGCTAACTTATCTGCTAAC
GCAAGTTATGTACCACAACAATATCGTAGTGTTGGTGCATCAATTAACAGTGGTATTACAGCTACAACTCAAGGTATTGC
GTTGCATCGTTCAGCTAATGGTGATACTCGTTTAATGATTGAAACACCAGGGGTTGGTGATGTACCTCTAGATAGTGGCG
TTATCAAAACTAATCACTTTGGACTTGCAGTTATTCCTAATGTTAATAGTTATCGTAAATCTACGGTTTCTATTAATACC
AGTCAGCTACCTGAAAATATAGAAACGCTAGAATCAACAACTGATATTACCTTGACTAAAGGGGCGATAGGGTATCGCAG
TTTATCAGTAATGAAAGGGGAAAAGTTGTTTGCCATTATATCCCTAAATGATGGTAAGAAACCGCCTTTTGGGGCAAGTG
TACGTAATGCGGATAATCGTGAGTTGGGTATTGTTGGTGAAGATGGTGTGACATGGCTAGTAGGCATTTCATCAAAAGAA
AAACTATCTGTTTATTGGGCAGGGAAAAAACAATGTGAGTTGTCACTTCCTGAAGATTTAGCATCGCCAACTAGCATGTT
ATTGCTACCTTGCTCTTCACCTACTATATCAAAAATTACAGAAAATTAA

Protein sequence : 
MGMVNSMIFELNQLRQVVLLTMSISVFSAYATEFNIDVLDAEDIQNIDMSQFSIAGYVPPGDYVLTVFVNGQRLGAPRDI
TVLEQKTQTQAICIPADLLDSIGLKESVKPKVTVYPNSQCLDLSVLKGMQTVIDLPTLSLKITIPQLWMEYRDPYWTPPA
LWEEGINGAFLDYSANVSITEEKEGDKRTYLSTNGTAGINLGVWRFRGDYSAIYQKKRGGRQSQEIHDFDFSRLYGFTSL
KKLASILTIGENYFYSDVFESWQYSGISLESDDRMLPPKLVGYAPEITGVADTNATVIVRSQNRVLLETTVPPGPFRIQT
LDSGVRGILDITIREENGEEKKFSISTASLPYLTRPGRLIYKLVMGKTRYDGHHLTGKPVFSGEFSYGLSNAWSLYGGTQ
FNSDYQATAIGIGRDLFSFGALSLDITQSFARFTDKKIKGRSYRLNYAKSFDALRTDITFAGYRFAARDYRTLTQFMDQR
RTGYDIRSPKENYQIYINKYFDNFNISLNYQYSTYWQDKPQTQYGLYASTNISIPMLSQQNANISLSATRTERDSGYQDD
AINLYLTIPLYKGHSISFSESYSRIGKSNQYSHRASYSGYSDRDNYSLNVGYSHGEEIDSQSSISGYYSRDFSQANLSAN
ASYVPQQYRSVGASINSGITATTQGIALHRSANGDTRLMIETPGVGDVPLDSGVIKTNHFGLAVIPNVNSYRKSTVSINT
SQLPENIETLESTTDITLTKGAIGYRSLSVMKGEKLFAIISLNDGKKPPFGASVRNADNRELGIVGEDGVTWLVGISSKE
KLSVYWAGKKQCELSLPEDLASPTSMLLLPCSSPTISKITEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfC CAD42029.1 PrfC protein Virulence PAI II 536 Protein 9e-154 44
papC AAZ04424.1 outer membrane usher protein Virulence PAI I APEC-O1 Protein 6e-153 44
papC YP_854254.1 outer membrane usher protein PapC Virulence PAI I APEC-O1 Protein 8e-153 44
papC NP_755465.1 PapC protein Virulence PAI I CFT073 Protein 4e-154 44
papC YP_002414015.1 Outer membrane usher protein PapC Not tested Not named Protein 3e-154 44
papC_2 NP_757034.1 PapC protein Virulence PAI II CFT073 Protein 3e-154 44
pixC CAE85159.1 PixC protein Not tested PAI V 536 Protein 6e-151 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMI0299 YP_002150078.1 fimbrial outer membrane usher protein VFG1548 Protein 5e-154 44
PMI0299 YP_002150078.1 fimbrial outer membrane usher protein VFG0884 Protein 2e-154 44
PMI0299 YP_002150078.1 fimbrial outer membrane usher protein VFG0895 Protein 1e-154 44