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Name : atfC (PMI2730) Accession : YP_002152431.1 Strain : Proteus mirabilis HI4320 Genome accession: NC_010554 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2980466 - 2982997 bp Length : 2532 bp Strand : + Note : - DNA sequence : ATGGTTAATAAGAATACTAATAAAGATATCGTTTATTTTCTCTTTCCAAGTGTCATTGCATTGTCATTGACGCTGTCCTT TTCATCATATAGCGCAAACCGATTTAATCCTGCATTTTTGGCTGACTCTCCTGATGCCGTCACCGATTTAAGTTATTTTG AAGCAGGCAACCGCATTAAACCCGGTGATTATCTTCTTGATATTGTTTTTAATCATGAGTATCTGCGTAGTGAAAATATT CATTTTATTAGTCAAGATAACCATGTTATTCCTTGTTTAAATCGAGATTATTATCAATCACTCGGGATCAATATTAAACT ATTTGCTGATTTTGAGAAATTCTCGGCAAATGAATGTATTGATATTGAAAAAATCATTCCAGATTCTGTTGTTAATTATG ATATTGAGAAACAAGCTTTAAATATTCAAGTCCCTCAAGCCGCGTTAGATTTGAAAGCACGCGGTTATATTCCACCAGAA AAATGGGATAACGGTATAACAGCAGGTATTTTAAACTACACCTTTAGTGGCGCTAATAGCTGGGGAAATTCTCATAATAA TAGCTACTACTTAAATCTACGTAGTGGGATCAATATTGGTGCTTGGCGATTACGCGATTATTCCACTTGGAATTCGTCAA ACGGGAAAAACCAATGGAACCATATCAATACCTATCTGCAACGCAATATTGTGTCATTAAGAAGCCAATTACAAATTGGT GATAGTTATACCTCATCAACACTTTTTGACAGTGTTAATTTTCGAGGTATTTCATTAGAAAGTGACGACACTATGCTACC TGATAGCCAAAGAGGATTTGCACCTGTAGTCAGAGGTATTGCTAAAGGCAATGCTAAAGTGGTGATCCGCCAAAACGGTT ATGTGATTTATCAAACCTTTGTTTCTCCGGGTGCTTTTGAAATCCGTGATCTCTATCCAACGTCAAATAGTGGCGACCTC TATGTCACCATTGAAGAAAATGATGGTAGCAAACACAGCTATGTTGTGCCTTATTCTGCTGTACCTATTTTACAGCGAGA AGGCCAAAAACAGTTTGTCATCCAAGCCGGTGAAATACGCCAAAATAACCAACATAAAAAACCTCGCTTTATACAAGGTC ATCTTATTTATGGCTTACCCTATGACACCACTGTCTATGGTGGTGCATTAGCAACAAAAGATTACCAATCTTATGCCCTA GGAGCAGGTAAAAATATGGGTACCCTAGGTGCCTTCTCTACCGATATCACCTTTGCTCATAGCCAATTGCCAAATAACTC AACATCAGATGGTTATTCTTTACGTTTTCTTTATGCCAAGTCGTTAAACCAATTTGGCACAAACTTTCAATTGCTCGGTT ATCGTTACTCTACTTCGGGTTTTTACACATTAGATGAGACATTAAATACGCGTATGTCCGGTTATCTGTATGAAGATAAT CAAAAAAAACCGTTGAGTTATTTTAATTTGCATAATCGCAAGAAAGGGAGCCTACAAATTAATTTATCACAACAACTGGG GGATTATGGCTCTATTTTTATGATGACCAACTGGCAAAATTATTGGGGAACTAATGAGAAAAATGTCCTAGTACAAACCG GCTACAATGGCAATATTAAAGGGCTCTCTTATAACGTCATTTATAGTTATAACAGAATGATGAATAGTGGTCAGCGTGAC CAAACATTGTCTGTGGGTCTTTCTATCCCATTACAATTGCTAATGCCGACAAGTTATCAATCCATCAATAGCACTTATCT CACATATAATTACAGCCACAATAATAACGGTTACTCGACACATAATGCGGGGATTGCTGGTACATTATTGGAAGACAATA CCCTTAATTACAGTGTTCAACAAGGTTATAGCAATCAAGGCGGAAACTATACCGGTAGTGCGGCGTTGGGTTATCAAAGT CGCTATGGCAATTTAAATGCTAGCTATAACTATCATCAAGATGCTCAACAAATTAACTATAGCCTCGCTGGAGGTATGCT ACTCCATAGTGGCGGATTAACCTTAAGCCAACCCTTAAGCGCTAATGCCATTTTAGTAGATGCTCGTAATACTGCGGATG TACCGATTGATAATGCGACAGGGGTTTATACTGACTGGCGAGGGTTTGCCGTTATTCCCTATGCTACCGCTTATCGACAA AATCGAGTGGCATTAGACACCACCGCATTACCCGATAATGTTGAAATTGAGCAAAACATTAAGCAGGTGATCCCAACACA AGGCGCCGTCATTAAAGTTCAGTTTGATGCTAAAAAAGGGTATCGCTTATTACTGACGCTACAACACCAAGGTCGCCCAC TCCCTTTTGGGGCAATAGCAACTGATAAACAAAATCATCTGTCCGGTATTGTTGGCGATGATGGCTTACTCTACTTATCG GGTGTCCCTGATTCAGGAAAATTAGAGATCCGCTGGGGGCATAATGCCTCTCAATACTGTCAAGTGAACTATCAATTACC CGCCTCTCAACTTGATGAACCTTTTGTGAAAATGACACAGGAGTGCCAATAA Protein sequence : MVNKNTNKDIVYFLFPSVIALSLTLSFSSYSANRFNPAFLADSPDAVTDLSYFEAGNRIKPGDYLLDIVFNHEYLRSENI HFISQDNHVIPCLNRDYYQSLGINIKLFADFEKFSANECIDIEKIIPDSVVNYDIEKQALNIQVPQAALDLKARGYIPPE KWDNGITAGILNYTFSGANSWGNSHNNSYYLNLRSGINIGAWRLRDYSTWNSSNGKNQWNHINTYLQRNIVSLRSQLQIG DSYTSSTLFDSVNFRGISLESDDTMLPDSQRGFAPVVRGIAKGNAKVVIRQNGYVIYQTFVSPGAFEIRDLYPTSNSGDL YVTIEENDGSKHSYVVPYSAVPILQREGQKQFVIQAGEIRQNNQHKKPRFIQGHLIYGLPYDTTVYGGALATKDYQSYAL GAGKNMGTLGAFSTDITFAHSQLPNNSTSDGYSLRFLYAKSLNQFGTNFQLLGYRYSTSGFYTLDETLNTRMSGYLYEDN QKKPLSYFNLHNRKKGSLQINLSQQLGDYGSIFMMTNWQNYWGTNEKNVLVQTGYNGNIKGLSYNVIYSYNRMMNSGQRD QTLSVGLSIPLQLLMPTSYQSINSTYLTYNYSHNNNGYSTHNAGIAGTLLEDNTLNYSVQQGYSNQGGNYTGSAALGYQS RYGNLNASYNYHQDAQQINYSLAGGMLLHSGGLTLSQPLSANAILVDARNTADVPIDNATGVYTDWRGFAVIPYATAYRQ NRVALDTTALPDNVEIEQNIKQVIPTQGAVIKVQFDAKKGYRLLLTLQHQGRPLPFGAIATDKQNHLSGIVGDDGLLYLS GVPDSGKLEIRWGHNASQYCQVNYQLPASQLDEPFVKMTQECQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 5e-179 | 45 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 3e-177 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| atfC | YP_002152431.1 | outer membrane usher protein | VFG0876 | Protein | 0.0 | 47 |
| atfC | YP_002152431.1 | outer membrane usher protein | VFG0446 | Protein | 1e-177 | 46 |
| atfC | YP_002152431.1 | outer membrane usher protein | VFG1645 | Protein | 1e-177 | 45 |
| atfC | YP_002152431.1 | outer membrane usher protein | VFG0912 | Protein | 1e-177 | 45 |
| atfC | YP_002152431.1 | outer membrane usher protein | VFG0454 | Protein | 8e-168 | 43 |
