Gene Information

Name : PMI2694 (PMI2694)
Accession : YP_002152395.1
Strain : Proteus mirabilis HI4320
Genome accession: NC_010554
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4789
EC number : -
Position : 2944792 - 2946891 bp
Length : 2100 bp
Strand : -
Note : -

DNA sequence :
ATGATTTATAAGTTTCTATTAGCAATAAAAAACAAACCAGAACTTATCGTACTATCAGTGATGATACTGGTTATAATGAT
GTTAATTATACCTTTGCCAACTTATTTGGTCGACTTTCTTATAGGTTTAAATATTACTATTGCAATTCTTATCTTTATGA
GTTCATTTTATATTAAACGTATACTGAACTTTATGACATTTCCTGCATTATTGCTTATAACAACTCTTTTCCGGCTTGCT
TTATCAATAAGCACTAGCCGTCTTATATTATTAGATGCCGATGCAGGAGAGATCATTACCTCATTTGGTGAGTTTGTCAT
TGGTGAAAATCTTGTTGTAGGTTTTGTTGTCTTTTCCATTGTGACCATAGTGCAATTTCTCGTGATTACTAAAGGATCTG
AACGAGTAGCGGAGGTCGCGGCTCGTTTTTCTTTGGATGGTATGCCTGGAAAACAAATGAGTATTGATGCTGATTTAAAA
TCAGGGATCATTACGAATGAAGAAGTTCAGATCAGAAGGAAAGAGTTAGGACAAGAGAGTCAATTATATGGTTCATTCGA
TGGTGCCATGAAATTTATAAAAGGGGATGCGATAGCCGGCATTGTCATTATCTTCGTGAACTTAATTGGTGGCATATCGG
TAGGTATGGCTCAAATGGGGTTATCTATTACAGAGGCATTACATACATATACACTTTTAACGATAGGGGATGGATTAGTT
GCACAAATTCCTGCTTTACTTATCTCTATTAGTGCCGGATTTATTGTAACACGTGTCGGTGGTGAAAATAATAATTTGGG
CTATAGCATTATGAATGAGCTATTGGCACAAGATTTTGCTTTGCTTGTTACAGCTATTTTGGCTTTTGGTATCGGTTTTT
TACCAGGATTTCCCACACCTGTTTTTCTTATTTTATCTGTAATGCTTGGCGTTTACTTTTTTAAAATAAAATGGAAGAGT
AGTAAAAAAGAATATAAAACAGAAGATGAAAAAGATAATCATAATGCTACTAATGCCGACAGTAAAAAAGGACTTATGTC
AAATTTATTTTCTGGTAAACATGGGGAAGAAGTAGATAATAGTTTATTAACAGAAAATATTACCTTATCACAAGCTGAAA
CTTTGCCATTAATCATCACTCTTTCTACTAAGAAAAAACCATATTTAACAAAAATAGTTTTTGAAAAATGGTTACAAAAA
GAATTTATTTTACAATATGGTATATTATTACCAGATATTGTGATTCACTATTCAGATAAAATAGATGACGATAAAATTAT
TATTTTAATTAACGAAGTTAAAGCAAAAGAACTTAATTGTCCTTTTCCTCTTTTTCATATAGAAAATCCTAATGATGAAT
TGCTCTCTTTAGGCTTTAACTTAATAAGTATTGAAGATGATAATAAAACCCATTATTGGATTGAGCGTGATGATGAATCT
AAATTAGCGCCATTAGGTTACAAAGCGGAACGTTCAGAAAGTTACTTTTATAGAAAATTCTCTGATCTGATCACATTAAA
TATTACAGAGTTTCTTGGTATTCAAGAAACAAAAGATATCCTTGATAAATTAGAAAAGAGTGCCCCTGAGCTTTTAAAAG
AGTGTTATAGGCAAGTTTCTATTCAGAGGATAAATGATGTTTTGCAACGATTAGTACAAGAAAAAATTCCTATTAGAAAC
ATAAAGACTATTATAGGGGGCTTAGTTCAATGGGGGAGCAAAGAAAAAGATCCCGTGCTACTTACTGAACACATTAGAAC
GCTTCTTGCTCGTTATATTAGTTATTTTTTTTCAACCGATGGGAAGTTTAATGCAATTATCTTATCTAACGATATGGAAG
AGATAATTCGTAGTGGAATAAGACAAAGTTCTTCTGGCACATTATTGAATTTAGAACCTGCTGAATTAGATATGATAATA
GAAAAAATATCTATGGTTATTGATGATATTAAATATATTCAGGATTATATATTTTTAACATCAATAGATATAAGGCGTTT
TGTAAAAAAACTAATAGAAACTCAATATCCTCAAATACCGGTATTATCTTATGATGAGATAACATCTGATATTGAAATTA
ATGTATTACAATCTATTTAG

Protein sequence :
MIYKFLLAIKNKPELIVLSVMILVIMMLIIPLPTYLVDFLIGLNITIAILIFMSSFYIKRILNFMTFPALLLITTLFRLA
LSISTSRLILLDADAGEIITSFGEFVIGENLVVGFVVFSIVTIVQFLVITKGSERVAEVAARFSLDGMPGKQMSIDADLK
SGIITNEEVQIRRKELGQESQLYGSFDGAMKFIKGDAIAGIVIIFVNLIGGISVGMAQMGLSITEALHTYTLLTIGDGLV
AQIPALLISISAGFIVTRVGGENNNLGYSIMNELLAQDFALLVTAILAFGIGFLPGFPTPVFLILSVMLGVYFFKIKWKS
SKKEYKTEDEKDNHNATNADSKKGLMSNLFSGKHGEEVDNSLLTENITLSQAETLPLIITLSTKKKPYLTKIVFEKWLQK
EFILQYGILLPDIVIHYSDKIDDDKIIILINEVKAKELNCPFPLFHIENPNDELLSLGFNLISIEDDNKTHYWIERDDES
KLAPLGYKAERSESYFYRKFSDLITLNITEFLGIQETKDILDKLEKSAPELLKECYRQVSIQRINDVLQRLVQEKIPIRN
IKTIIGGLVQWGSKEKDPVLLTEHIRTLLARYISYFFSTDGKFNAIILSNDMEEIIRSGIRQSSSGTLLNLEPAELDMII
EKISMVIDDIKYIQDYIFLTSIDIRRFVKKLIETQYPQIPVLSYDEITSDIEINVLQSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaV AAS66840.1 YsaV Not tested SSR-1 Protein 7e-138 53
invA NP_806499.1 virulence-associated secretory protein Virulence SPI-1 Protein 2e-143 51
invA NP_461817.1 needle complex export protein Virulence SPI-1 Protein 2e-143 51
invA YP_217815.1 invasion protein Virulence SPI-1 Protein 2e-143 51
invA NP_457290.1 possible secretory protein (associated with virulence) Virulence SPI-1 Protein 2e-143 51
ECs3731 NP_311758.1 EivA Not tested LIM Protein 1e-135 50
invA AAS66860.1 InvA Not tested SSR-2 Protein 9e-133 47
escV AFO66414.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-91 41
escV AFO66296.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-92 41
lssD AAO18050.1 LssD Virulence TTSS locus Protein 1e-101 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMI2694 YP_002152395.1 type III secretion system protein VFG1780 Protein 7e-144 53
PMI2694 YP_002152395.1 type III secretion system protein VFG1006 Protein 2e-132 51
PMI2694 YP_002152395.1 type III secretion system protein VFG0557 Protein 9e-144 51
PMI2694 YP_002152395.1 type III secretion system protein VFG2461 Protein 3e-130 49
PMI2694 YP_002152395.1 type III secretion system protein VFG0384 Protein 9e-106 42
PMI2694 YP_002152395.1 type III secretion system protein VFG0198 Protein 5e-98 42