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Name : pmfC (PMI1878) Accession : YP_002151605.1 Strain : Proteus mirabilis HI4320 Genome accession: NC_010554 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2025557 - 2028043 bp Length : 2487 bp Strand : + Note : - DNA sequence : ATGTTAATTCCTTATTCACCCCACACAATATGGAAGACCATTTGTGCGACTTTGCTATTAAGCTTGGCGTTTTTCTCACA AGCAGAGCAGGACGATTCTGTGGAATTTAACATTCATATGCTAGACGCGGAAGATCGCGATAATGTCGACCTTTCACGTT TTTCTACCTCAAATTATATCATTCCGGGTATGTACTATTTAGATATTCGTCTAAATGGTCGCGACTTTCCTCGCCAAAAT ATTAATTATATTGAAGTAGCAGATAATCATTCCGTGGCTTGTATCGACCCTACTCTTTTAAAAAAGTTAACAATCAACCA AGAAAACCAAAAATATATCAAACAAATATCACCAGATTGTTTTGATATTAGCCAATTACCCGGTATCTCGATTAAAAATG ATGGTGGTGTACTTGATATCACGTTACCGCGCTCATTAATGAAATATGAAGAATCTGATTGGACACCTCCGGAGCTTTGG GATAGCGGGGTCTCTGGGCTTATTTTTGATTATACACTAACAGGAACGTCAACTCGCCCTAATAAAGGCAATAATAACAA TACGTTAACTGGTTATGGTCAAGCGGGATTAAACTTGGGTGAATGGCGTTTACGAGCTGAATATCAAGGCAATTATTCTT CTGAATATTCATCTAACAATCGTTTTGATTGGAACCAAATTTATGCCTATAAGCCATTACCTGATCTCGCAGCTAAATTA ACGGTTGGGGAAACTTATTTAAACTCTCAAATTTTTGATAGTTTCCGTTTTACAGGAGCCAATTTACAAAGCGATGAGAG AATGTTACCCCCTTCTCTCCAAGGCTATGCACCTGAAATTCATGGCATCGCCAATACCAATGCAAAAGTGACGGTAACCC AAAATGGACGTTTAATTTATGAGACAACCGTACCTGCTGGCCCTTTCGTGATTAACCATCTACAAAATACCGTACAGGGT CAACTCGATGTTAGAGTTGAAGAGCAAAATGGTAAGATTAACGAATTTCAAGTGCAAACCGCTAATTTGCCTTATATGAC TCGCCCAGGATCTGTGCGTTTTAATACCTCACTGGGACAGTCATCCGTGAACAACCATAAAATGCAAGGCCCTCTTTTCT ATCAAGGGGATTTTTCATGGGGGATGAATAATACATGGTCTCTCTATGGTGGTACTTTACTTACCGCTAAAGATTATAAC GCATGGTCTTTAGGTATCGGCCATGATATGGGACGTTTTGGTACCCTTTCTGGTGATATTACACAGTCTTATAGCAAAAC CTATGATAATGAAAAAATCAATGGGATGTCTTTTAAACTAAACTATGCAAAAACTTTTGATGAGTACCACAGTACCATTA CTTTTGCAGGTTATCGTTTCTCAGAAAAAACATTTCGCTCTTTTTCTCAGTATATTGATGAGCGTTATAACGGCATCAAT AATAATGGCTATGAAAAAGAAATGTACACCATTACCGGTAATAAAACTTTTTGGGCAGATGATGCAGAGAAATCGACCAC CCTCTATCTCTCTTATCGCCACCAAAATTACTGGGATAAAAATACTCAAGAGCAGTATGGTGTCACAGTAAGTCGTAATT TTTCCATTATGGGGATTGAGCAAATCAATACCAACTTGTCAGCATTTCGTACCCAATATAAAGGGAATACTGACGATACG CTCTCTTTTAATATTTCACTACCATTAGGAAGTGGTCGCAATATTGGTTATAACTTGCAAGATAACAATGGCAAAGTGAC ACAAATGGCCTCTTATGCTGATAATCGCGATTATAATAATTTATGGCGCATAAGAGCAGGCTTAAGTTCGGATAAGAAAG CCAATACCGATGGTTATTATCAACATCGTTCTCAGTATGCAGAAATCAATGCCAATGCAAGCTATCAACAAGATAATTAC TTAGCAGTGGGCGCAACGATAAAAGGCGGTTTTACTGCTACTCGTTATGGCGCTGCATTACACAGTAGCAGTATGACCTC TAGCACCGCAAGAATAATGGTGGATACTGATGGTGTTGCAGGGGTGCCCTTTAATGGTCAAAGCACGACTACGAACCGCT TCGGCATTGGCGTACTAACCGACTTAACAAGTTATAACAATGTTGATGCACGTATTGACGTCGATAAGATGGATCAAGAT ATCGAAACGCGTAAAGCCATTGCTTCAACAACCTTAACAGAAGGTGCCATTGGTTATTACCAATTTCCGGTTCGTCAAGG TGAACGCTTAATGGCTGTCTTACAGACAACTGATAATAAATACCCTCCTTTTGGTGCGGAAGTCACCAATCAAAAAGGGG AAAGTATTGGTATGGTGATGGAAGAAGGCCTTGTTTATATTGCGGGTGTTAACCTTAATGAATCATTAAATGTAATTTGG AACGGTAAAACACAATGTTCAATTACCATTCCCGCGGAAATAACAGATCCCTTAAAACATCAATCGCTCGTTTGTCAGGA TCGTTAA Protein sequence : MLIPYSPHTIWKTICATLLLSLAFFSQAEQDDSVEFNIHMLDAEDRDNVDLSRFSTSNYIIPGMYYLDIRLNGRDFPRQN INYIEVADNHSVACIDPTLLKKLTINQENQKYIKQISPDCFDISQLPGISIKNDGGVLDITLPRSLMKYEESDWTPPELW DSGVSGLIFDYTLTGTSTRPNKGNNNNTLTGYGQAGLNLGEWRLRAEYQGNYSSEYSSNNRFDWNQIYAYKPLPDLAAKL TVGETYLNSQIFDSFRFTGANLQSDERMLPPSLQGYAPEIHGIANTNAKVTVTQNGRLIYETTVPAGPFVINHLQNTVQG QLDVRVEEQNGKINEFQVQTANLPYMTRPGSVRFNTSLGQSSVNNHKMQGPLFYQGDFSWGMNNTWSLYGGTLLTAKDYN AWSLGIGHDMGRFGTLSGDITQSYSKTYDNEKINGMSFKLNYAKTFDEYHSTITFAGYRFSEKTFRSFSQYIDERYNGIN NNGYEKEMYTITGNKTFWADDAEKSTTLYLSYRHQNYWDKNTQEQYGVTVSRNFSIMGIEQINTNLSAFRTQYKGNTDDT LSFNISLPLGSGRNIGYNLQDNNGKVTQMASYADNRDYNNLWRIRAGLSSDKKANTDGYYQHRSQYAEINANASYQQDNY LAVGATIKGGFTATRYGAALHSSSMTSSTARIMVDTDGVAGVPFNGQSTTTNRFGIGVLTDLTSYNNVDARIDVDKMDQD IETRKAIASTTLTEGAIGYYQFPVRQGERLMAVLQTTDNKYPPFGAEVTNQKGESIGMVMEEGLVYIAGVNLNESLNVIW NGKTQCSITIPAEITDPLKHQSLVCQDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 2e-154 | 42 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 2e-154 | 42 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 9e-159 | 42 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 9e-155 | 41 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 1e-153 | 41 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 9e-154 | 41 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 1e-154 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pmfC | YP_002151605.1 | outer membrane usher protein | VFG0884 | Protein | 7e-155 | 42 |
| pmfC | YP_002151605.1 | outer membrane usher protein | VFG0895 | Protein | 9e-155 | 42 |
| pmfC | YP_002151605.1 | outer membrane usher protein | VFG1548 | Protein | 5e-155 | 41 |
