Gene Information

Name : sitD (PMI1024)
Accession : YP_002150774.1
Strain : Proteus mirabilis HI4320
Genome accession: NC_010554
Putative virulence/resistance : Virulence
Product : iron ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1089417 - 1090274 bp
Length : 858 bp
Strand : -
Note : -

DNA sequence :
ATGAATGAATTAATGGAATTTTTCATTGAACCTTTTCAATATCCTTTTATGCAACGTGCAATTATTGCCGCGGTTATCAT
TGGTATCGCCTGCGCTATTTTATCTTGCTATATGGTGTTAAAAGGTTGGTCACTAATGGGAGATGCTATTTCTCACGCTG
TTTTACCTGGCGTGGTATTAGCTTATGTCACTGCAATTCCTTTAACGATAGGGGCTTTTCTTTCGGGCCTATTTTGCTCA
TTTGCAACAGGTTATTTAAAAGAGCATAGCCGAATAAAAGAAGATACGGTAATGGGAATTGTCTTTTCTGGTATGTTTGC
TGTCGGTTTGGTGATCTTCGCTAGTGTAGATACTGACCAACATTTAATGCATATATTATTTGGTAATATCTTAGGTATCA
CCCCAGATGTGCTTATACAGATTAGTGCTATTTGTTTAATTACTATTACTATTATGCTGGTTAAACAAAAAGACTTTATG
TTGTATTGTTTCGACCCTAATCAAGCAAGAATTGTCGGTCTCCCGGTCGCTTTATTACATTATGGCTTACTCTCTATTTT
GGCGTTAACGATTGTCGCCTCGATGCAAGCCGTTGGGATTATTTTAGTGGTCGCCATGCTGATTTCTCCGGGGATCACCG
CTTATCTATTAACGCGAAGCTTCTCTCGAATGATCACTCTCGCTATCCTTTTTTCTGTTATATCGAGTGTTATTGGTACA
TTTATCAGTTTTCATATTGACGGTGCCACAGGCCCTTCTATTGTACTCACGCAAGCGGTGTTCTTTATTATTGCATTACT
CTGTAATCAGATTAAATTGGCAAAAATAAAACGGCAAACTAAACCCGCCAATGCCTAA

Protein sequence :
MNELMEFFIEPFQYPFMQRAIIAAVIIGIACAILSCYMVLKGWSLMGDAISHAVLPGVVLAYVTAIPLTIGAFLSGLFCS
FATGYLKEHSRIKEDTVMGIVFSGMFAVGLVIFASVDTDQHLMHILFGNILGITPDVLIQISAICLITITIMLVKQKDFM
LYCFDPNQARIVGLPVALLHYGLLSILALTIVASMQAVGIILVVAMLISPGITAYLLTRSFSRMITLAILFSVISSVIGT
FISFHIDGATGPSIVLTQAVFFIIALLCNQIKLAKIKRQTKPANA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-63 56
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-63 56
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-63 56
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-63 54
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 8e-64 54
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 5e-38 41
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 7e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitD YP_002150774.1 iron ABC transporter BAC0442 Protein 6e-84 66
sitD YP_002150774.1 iron ABC transporter BAC0352 Protein 5e-64 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitD YP_002150774.1 iron ABC transporter VFG0528 Protein 4e-64 54