Gene Information

Name : BamMC406_6582 (BamMC406_6582)
Accession : YP_001812255.1
Strain :
Genome accession: NC_010553
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 74303 - 74977 bp
Length : 675 bp
Strand : +
Note : KEGG: bte:BTH_II0366 transposase

DNA sequence :
GTGAAACTGGTTTGTGAAGTTCTCGGCGTGTCGCGCTCGAACGTATCGGCACGACTGTCGCGTCCGGCGACGTGGCGCGA
TGGCCGTCAATCGAGGTGGACTGACGACGCGGTCGCGGTCGAGGAAATCCGCCGGGTCATCGGCGATTTGCCCAGCTATG
GCTATCGCCGGGTTTGGGGCATATTGCGCAACGAGCCCGTCGCGGTTGGGCTGGCACCGTTCAATGCCAAGCGCATCTAT
CGCGTCATGCGCACGCACGGGTTGCTGATGCAGCGTCGGCCGATTCCGCCTCGCCCCCAACGTCGGCACGACGGCAAGGT
GGCCGTAGCGCGCAGCAATCAGCGATGGTGCTCCGACGGATTCGAGTTTCGCTGTGACAACGGCGAGCCGCTGCGCGTGA
CGTTTGCGCTGGACTGCTGCGACCGTGAGGCGATGAGCTGGGCGGCCACGACGGCAGGCCACAGCGGTGACATCGTGCGC
GACGTGATGCTGGCTGCAGTGGAAAATCGGTTTGGCAACGAACTGCATACCCCGTCCGAAATCGAGTGGCTGAGCGACAA
CGGCTCGGGCTACACGGCCGACGACACGCGTCGGTTCGCTGCGGCCATCGGCCTGAAGCCATTGACCACGCCGTGTGCAG
CCCACAAAGTAACGGGATGGCCGAGAGCTTCGTGA

Protein sequence :
MKLVCEVLGVSRSNVSARLSRPATWRDGRQSRWTDDAVAVEEIRRVIGDLPSYGYRRVWGILRNEPVAVGLAPFNAKRIY
RVMRTHGLLMQRRPIPPRPQRRHDGKVAVARSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSWAATTAGHSGDIVR
DVMLAAVENRFGNELHTPSEIEWLSDNGSGYTADDTRRFAAAIGLKPLTTPCAAHKVTGWPRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 1e-50 59
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 2e-51 59
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 1e-49 59
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-48 58
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 3e-54 56
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 2e-53 56
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 1e-53 56
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 5e-53 56
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 2e-53 56
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 2e-53 56
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 2e-51 55
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 9e-52 54
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-45 47
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-45 47
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 2e-43 46
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 2e-47 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_6582 YP_001812255.1 transposase VFG0649 Protein 1e-48 58
BamMC406_6582 YP_001812255.1 transposase VFG1732 Protein 1e-54 56
BamMC406_6582 YP_001812255.1 transposase VFG0608 Protein 8e-54 56
BamMC406_6582 YP_001812255.1 transposase VFG0621 Protein 8e-54 56