Gene Information

Name : BamMC406_6673 (BamMC406_6673)
Accession : YP_001812326.1
Strain :
Genome accession: NC_010553
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 170205 - 170762 bp
Length : 558 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bte:BTH_II0121 protein of unknown function (DUF770) superfamily

DNA sequence :

ATGATCAAGCTGGAGAAGCTTATGGCCATATCCAACAGTGCACAGAAATTTATTGCGCGCAATCGTTCGCCGCGCGTCCA
GATCGAGTACGACGTCGAAATTTACGGCTCGGAAAAGAAGGTGGAGTTGCCGTTTGTAATGGGCGTGCTCGCCGATCTGT
CCGGCAAGCCGTTGGAGGCGCTTCCTGCTGTCGGCGACCGCAAGTTCTACAACATCGACATCGATAACTTTGATGAGCGG
ATGAAGGCGATGAAGCCCCGGGTGGCCTTTTCGGTGCCAAATACGCTGTCTGGCACCGGACAGCTGATGGTCGACATCAC
GTTCGAGAGCATGGACGACTTTTCGCCAGCGGCTGTTGCGAAAAAGGTCGATGCGCTGTCGCAGCTGCTCGAAGCGCGGA
CGCAACTCGCGAACCTGCAGACCTACATGGACGGCAAGTCGGGCGCGGAGAACCTCGTTAGCCAGGTGCTGAAGGATCCG
GCGTTGCTCAATGCGCTCGCCAAAGCGCCGAAGCCTGAAGCGCGGAAGGCGGCAGCTCCGGAACCGCAAGAGCAATAA

Protein sequence :

MIKLEKLMAISNSAQKFIARNRSPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEALPAVGDRKFYNIDIDNFDER
MKAMKPRVAFSVPNTLSGTGQLMVDITFESMDDFSPAAVAKKVDALSQLLEARTQLANLQTYMDGKSGAENLVSQVLKDP
ALLNALAKAPKPEARKAAAPEPQEQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	4e-58	82

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
BamMC406_6673	YP_001812326.1	type VI secretion protein	VFG2069	Protein	2e-53	75