Gene Information

Name : BamMC406_3938 (BamMC406_3938)
Accession : YP_001810620.1
Strain :
Genome accession: NC_010552
Putative virulence/resistance : Virulence
Product : ribonuclease III
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 3.1.26.3
Position : 939199 - 940275 bp
Length : 1077 bp
Strand : -
Note : PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_3431 glycosyl transferase, family 2

DNA sequence :
ATGTCCACGCAAGCCAGGAAGCCGCTGATCTCGCTCGTCGTGCCGTTTCATGACGAAGAGGAAACGATCGACGCGTTCTT
TGCCGAAACGCTGCCCATTCTGGAGTCGGTCGCCGCGGTCCGCTTCGAGATCATCTGCATCAACGACGGCAGCCGCGATC
GCACGCTCGACCGGCTGCTCGCGATCGCCGCCGGCGACGCGCGCGTGCACGTCGTGGATCTCACGCGCCGCTTCGGCAAG
GAAGCGGCGCTCACCGCGGGCCTCGACGAGGCGGCCGGCGCCGCGGTGATCCTGATCGACGCCGACCTGCAGGACCCGCC
CGCGCTGATTCCCGCGATGATCGAACGCTGGCGCGGCGGCGCCGAGGTCGTCGCCGCGAAACGCACCGACCGGATGTGCG
ATCCCTACCTGCAGCGCGCGGCGGCGGCGCTGTACTATCGCGTGCACAACGCGCTGTCCGAGGTGGAAATGCCGGAGAAT
GTCGGCGACTTCCGCCTGATGGATCGCGAGGTCGTCGATGCGCTGCGCGCGCTGCCGGAGCGGCGACGGTTCATGAAGGG
GCTGTTCGCATGGGTCGGCTTTCGCACCGAGATCATCGAATACACGCGTGCGCCGCGCAGCGGCGGCCGCTCGAAGTTCT
CCGGGTGGCGGCGCTGGAATTTCGCGCTCGAGGGCATCACGAGCTTCAGCACGGTGCCGCTGCGCGTGTGGACCTACGTC
GGCATCACGTTCGCGATGCTCTCGCTCGTGTACGGCGCGTTCATCGTCGTACGCACGCTGTTGTTCGGCAATCCGGTGCA
CGGCTACCCGTCGCTGATTTCGGTCGTGCTGTTCGTCGGCGGCATCCAGCTGATCGGCATCGGCGTGATCGGCGAATACC
TCGGCCGGATCTATCACGAGTCGAAGCAGCGCCCCGTCTATCTCGTCAGGCGGCGCTACCGGGCCGAGCGGGACGCCGCC
GCGCAGCCCGCATCGAAGCTGCTGCAGTTCCCGCTCAAGCGTACGCATGCGGCCCGCCGCCGGACGACGATACCGGCCGC
CGCCGGCCTCGCCGCCCGCAAGGCGTCGTTCAAGTAA

Protein sequence :
MSTQARKPLISLVVPFHDEEETIDAFFAETLPILESVAAVRFEIICINDGSRDRTLDRLLAIAAGDARVHVVDLTRRFGK
EAALTAGLDEAAGAAVILIDADLQDPPALIPAMIERWRGGAEVVAAKRTDRMCDPYLQRAAAALYYRVHNALSEVEMPEN
VGDFRLMDREVVDALRALPERRRFMKGLFAWVGFRTEIIEYTRAPRSGGRSKFSGWRRWNFALEGITSFSTVPLRVWTYV
GITFAMLSLVYGAFIVVRTLLFGNPVHGYPSLISVVLFVGGIQLIGIGVIGEYLGRIYHESKQRPVYLVRRRYRAERDAA
AQPASKLLQFPLKRTHAARRRTTIPAAAGLAARKASFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-68 57
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-66 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_3938 YP_001810620.1 ribonuclease III VFG0670 Protein 7e-67 56