Gene Information

Name : BamMC406_3495 (BamMC406_3495)
Accession : YP_001810178.1
Strain :
Genome accession: NC_010552
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 424431 - 425096 bp
Length : 666 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_5325 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCATTCTCGTCGTGGAGGACGATGCCGAAATCGGCGCGGCGATCCGCAGCCGTCTCACGCGGCTCGGCCATGCCGT
CGATCTCGAGACCGACGGTTCGACCGCGAACAGCCTGCTGCGCGTCGAGCGCTTCGACCTCGTCGTGCTCGATGCGAACC
TGCCCGGGCTCGACGGCTTCGCGGTGCTGCGCAACCTGCGCGCATCGGGCAGCACGACGCCGGTGCTGCTCGTCACCGCG
CGCTCGGCGATCGACGACCGCGTGAGCGGCCTCGGTTTCGGCGCCGACGACTATCTCGTGAAGCCGTTCGACTACCGCGA
GCTCGAAGCGCGCGTGCAGGCGCTGCTGCGCCGCAACAGCGGCCATGCGAACGACGTGCTGACGCTCGGCGGCCTCGTGA
TCGATCGCAGCAGCCGCCTCGCGGAACTCGACGGCCAGCCGCTGTCGCTGTCGCGCCAGGAGTTCGCGCTGCTCGAGATT
CTCGCGAGCCGTCCGCAGCGGATCTTCTCGAAGGACGAACTGCTGAACCAGCTGTTCAGCTTCGGCAACGAGCCGAGCGC
GAACGCGGTCGAGCAATACGTGACGCGCGTGCGCAGAAAGCTGCAGGGCAGCTCGGTCGAAATCCGCACCGCGCGCGGGA
TGGGGTATCAGATTGCCGCGCATTGA

Protein sequence : 
MRILVVEDDAEIGAAIRSRLTRLGHAVDLETDGSTANSLLRVERFDLVVLDANLPGLDGFAVLRNLRASGSTTPVLLVTA
RSAIDDRVSGLGFGADDYLVKPFDYRELEARVQALLRRNSGHANDVLTLGGLVIDRSSRLAELDGQPLSLSRQEFALLEI
LASRPQRIFSKDELLNQLFSFGNEPSANAVEQYVTRVRRKLQGSSVEIRTARGMGYQIAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_3495 YP_001810178.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-36 42
BamMC406_3495 YP_001810178.1 two component transcriptional regulator BAC0638 Protein 2e-28 42
BamMC406_3495 YP_001810178.1 two component transcriptional regulator BAC0083 Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_3495 YP_001810178.1 two component transcriptional regulator VFG1390 Protein 3e-35 41
BamMC406_3495 YP_001810178.1 two component transcriptional regulator VFG1389 Protein 2e-29 41