Gene Information

Name : BamMC406_3376 (BamMC406_3376)
Accession : YP_001810059.1
Strain :
Genome accession: NC_010552
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 293703 - 295169 bp
Length : 1467 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase_; KEGG: bam:Bamb_5214 betaine-aldehyde dehydrogenase

DNA sequence : 
ATGCAAACCCAACTCTTCATCGACGGCCGCTTCGTTGACGCCGTCGAGCGCGGCACCATCGACGTGCTCAATCCGCACGA
CGGCTCGCTGATCACGACGATCGCCGCCGCCACCGCGGCGGACGTTGACCTGGCCGTGGAAGCGGCCACCCGCGCGTTCC
CGAAGTGGTCGGCCATGCCGGCGGCCGAACGCGGCCGGCTGCTGCTGCGTCTGGCCGACGCGATCGAAGCCAGCGCGGAG
GAACTCGCGCAGCTCGAATCGCTGGACACCGGCCACCCGATCCGCGATTCGCGCGGGCTCGACGTGCCGCGCACGGCAGG
ATGCTTCCGCTACTTCGGCGGGATGGCCGACAAGCTGCAGGGCTCGGTGATTCCGGTCGAAGCCGGCTTCCTGAACTACG
TGCAGCGCGCGCCGATCGGCGTCGTCGGCCAGATCGTGCCGTGGAATTTCCCGCTGATGTTCACGAGCTGGAAGATGGGC
CCGGCGCTGGCCGCGGGCAACACGGTGGTGCTCAAGCCGTCGGAGATCACGCCGCTGTCGACGCTGCGTATCGTCGAGCT
GATGGCCGAGGTCGGGTTCCCGGCCGGTGTCGTCAACATCGTCCCCGGTTACGGGCATACGGCGGGCCAGCGGCTTGCCG
AACATCCGGGTGTCGGGAAGATCGCGTTCACCGGTTCGACGGCGACCGGCCGCCGGATCGTCGAGGCATCGCAGGGCAAC
CTGAAGCGCGTGCAGCTGGAGTTGGGCGGCAAGGGCGCGAACATCGTGTTCGACGATGCGAACCTCGACGCCGCCATCAA
CGGCGCCGCGTGGGCGATCTTCCACAACCAGGGGCAGGCGTGTATCGCGGGTTCGCGTCTCGTGCTGCACGAACGCATCG
CCGACGCATTCCTCGAGCGCTTCGTGTCGCTGGCGTCGTCGATCCGTGTCGGCGATCCTCTGGACCCGGACACCGAGATG
GGGCCGCTCACGTCAAAGCAGCACCTCGACCGCGTCCTGTCGTTCGTCGACGTCGCGCGCGAGCAGGGTGGCCGTGTGCT
CGCGGGTGGCAGCGTGCCGCAGGATGCGGCGCTCGCCGACGGCTACTACGTGCGTCCGACGGTCATCGAAGCGAAGAGCG
CGGCCGATCGCGTCGCGCAGGAGGAAGTGTTCGGCCCGTTCGTCACCGTGCTGCGCTTCGGCAGCGACGACGAAGCGCTG
TCGATCGCCAACGCGACCGAATACGGGCTCGGCAGCGGCCTGTGGACCAACGATCTGTCCCGCGCGCACAGGATGGCAGC
GCGCATCGACGCGGGCATGTGCTGGATCAACTGCTACAAGCGCGTCAATCCGGGTAGCCCGTTCGGCGGCGTCGGCCAGT
CGGGCTACGGCCGCGAGATGGGTTTCGAGGCAATGCACGACTACACGGAAGCGCGCTCGGTGTGGGTCAACGTCGACGGC
AACGTGCCGCCGCACTTCAAGCGCTGA

Protein sequence : 
MQTQLFIDGRFVDAVERGTIDVLNPHDGSLITTIAAATAADVDLAVEAATRAFPKWSAMPAAERGRLLLRLADAIEASAE
ELAQLESLDTGHPIRDSRGLDVPRTAGCFRYFGGMADKLQGSVIPVEAGFLNYVQRAPIGVVGQIVPWNFPLMFTSWKMG
PALAAGNTVVLKPSEITPLSTLRIVELMAEVGFPAGVVNIVPGYGHTAGQRLAEHPGVGKIAFTGSTATGRRIVEASQGN
LKRVQLELGGKGANIVFDDANLDAAINGAAWAIFHNQGQACIAGSRLVLHERIADAFLERFVSLASSIRVGDPLDPDTEM
GPLTSKQHLDRVLSFVDVAREQGGRVLAGGSVPQDAALADGYYVRPTVIEAKSAADRVAQEEVFGPFVTVLRFGSDDEAL
SIANATEYGLGSGLWTNDLSRAHRMAARIDAGMCWINCYKRVNPGSPFGGVGQSGYGREMGFEAMHDYTEARSVWVNVDG
NVPPHFKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-80 46
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 9e-75 44
hpaE AAO17179.1 HpaE Not tested tcd island Protein 4e-75 41
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-76 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-76 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-76 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-76 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_3376 YP_001810059.1 aldehyde dehydrogenase VFG0082 Protein 3e-76 41