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Name : BamMC406_5390 (BamMC406_5390) Accession : YP_001812050.1 Strain : Genome accession: NC_010552 Putative virulence/resistance : Unknown Product : Fis family proprionate catabolism activator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 2627353 - 2629335 bp Length : 1983 bp Strand : + Note : KEGG: bam:Bamb_4843 sigma54 specific transcriptional regulator, fis family; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activa DNA sequence : ATGGACCTCTCCTCGACCAAGCCCGTCGGCCCGGCTGACCGCACGGTGCGCCCGCGCATCTGGGCGATGGGCATCAGCCG CCTGCGCGACCTGTTTCGCGAGATCGCCGGCGAATTCGACGAACGCGCCGACGTGCGCATCGTCACACGGGCCTACGAAG ACGCGCTCAGCGCAATCGCGGAAGCCGGCACCGCGCGGCCCGACGTGATCGTCGCGGCTGGCTCGAACGGCGGCTTCCTG AAAACGCGTGCGCAGGTGCCGGTCGTGGTCGTGTCGCCGACCGGCTTCGACGTGATGCAGGCGCTCGCGCGCGCACGGCG CGACGCCACCCGGATCGCCCTCGTCAGCGCCGGCGAGACGCCGCCGGAGGTGCGCCGCTTCGTCGCCGCCTACGGCCTCG ACGTGCAGTTTGCGTCATATCAGTCCGCTCAGGAAGCGGAAGCCTGCGTGCTCGATCTGCACGACCGCGGCATCGAGACG ATCGTCGGCCCCGGCCTCGTCACCGATCTCGCGGCGAGTGCCGGCATGGGCGCGGTGTTCCTGTATTCGCACGCGTCGGT GCGCAAGGCGGTCGAAACGGCGCTCGAAGTCGCGTACGCGACGCATGCCGAGGCGTTTCGCCGGCAGCGCCTCGACAACC TGTTGCAGCACCTGCGCGACGGGGTGGTCGCGCTCGACGCGCGTGGTCACGTCGAGGCGATCAACGAGCGGCTCGCGTCG GCGCTCGGGGTCGAACCGGCGGCGGCCGTCGGCCGCGCGCTCGTCGACCTGCGGCCCGAGCTGCGCACGCTGCGCGGCGA GGACGGCGACGCGCTCGCGACGGTGCGCGGCGTGCGCTACGTCGTGCATCGCGGGCCGCTCGTCGATCGCGGCGTCACGT CGGGCAGCGTGCTGACCTTCCAGGAATCGCGCGCGGTCGAACGGCTCGACCGCGCGCTGCGTTCGCAGCCGAACACGCAG CAGTTCGCGGCGCGCTACGCGCTCGACGACGTGGTCGGCGCGTCCGCGCCGATGGCGCGCGTGCGCGACCTCGTGCGCCG CTACGCGAAATCCGACGCCACCGTGCTCGTGCTCGGCGAAAGCGGCACCGGCAAGGAGATGATCGCGCAGAGCCTGCACG CGCTGTCCGTGCGGCGCAGCTATCCGTTCGTCGCGATCAACTGCGGCGCGTTTCCGGAAGCGCTGCTCGAGAGCGAGCTG TTCGGTTACGAGGAAGGCGCGTTCACCGGCGCGCGGCGCGGCGGCAAGACCGGGCTGTTCGAGGCTGCACACCGCGGCAC GCTGTTTCTCGACGAGATCGGCGAGATGCCGCCGTCGCTGCAAAGCCGGCTGCTGCGCGTGCTGCAGGAGCGCGAGGTGA TCCGCCTCGGGTCGACCGAGCCGATCCGCATCGACGTGCGCGTGATCGCCGCGACGCACCGGCCGCTGCTCGCGGCCGTC GAAGCCGGCACGTTCCGCGCGGATCTGTATTACCGGCTCAACATCCTGAACATCGGCCTGCCGCCGCTGCGCGAGCGTGC GGCCGACATTCCGGCGCTCGCGGCCACGCTGCTCGTGCAGGCCGCGCGGCGCGAGCCTCGGCTGGCCGAACGCGTGCGCG AGGTCGGTGATGCGATGCGCGTGTTCGGCGCGACGCAGGCGACGCTCGCCCGCTACCGCTGGCCCGGCAACGTGCGGGAA CTGCAGAACGTGGTCGAGCGGATCGCGGTGGAACTGGCCGAGGAAGTCGACGAGCAGGATCCCGGCGCCCCGTGCGCCGC GCTCGCGCCCGATGCGCTGCAGGCGATCGCGCCGGAGTTGTTCGCGACACCGCCCGAGGCCGCCGATCCCGACGACGCGC AGACGCTGCAAGCACGCCGCCGCCGCGCGGAAGCCGACGAGATCCGCGCGGTGCTCGATGCGTGCGGCGGCGACCGCGAT CGCGCGTGTGCGATGCTGGGCATCAGCAAGACGACGCTGTGGCGGAAGCTGTCGGCGAAGTAG Protein sequence : MDLSSTKPVGPADRTVRPRIWAMGISRLRDLFREIAGEFDERADVRIVTRAYEDALSAIAEAGTARPDVIVAAGSNGGFL KTRAQVPVVVVSPTGFDVMQALARARRDATRIALVSAGETPPEVRRFVAAYGLDVQFASYQSAQEAEACVLDLHDRGIET IVGPGLVTDLAASAGMGAVFLYSHASVRKAVETALEVAYATHAEAFRRQRLDNLLQHLRDGVVALDARGHVEAINERLAS ALGVEPAAAVGRALVDLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTFQESRAVERLDRALRSQPNTQ QFAARYALDDVVGASAPMARVRDLVRRYAKSDATVLVLGESGTGKEMIAQSLHALSVRRSYPFVAINCGAFPEALLESEL FGYEEGAFTGARRGGKTGLFEAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV EAGTFRADLYYRLNILNIGLPPLRERAADIPALAATLLVQAARREPRLAERVREVGDAMRVFGATQATLARYRWPGNVRE LQNVVERIAVELAEEVDEQDPGAPCAALAPDALQAIAPELFATPPEAADPDDAQTLQARRRRAEADEIRAVLDACGGDRD RACAMLGISKTTLWRKLSAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 5e-101 | 41 |
