Gene Information

Name : BamMC406_4933 (BamMC406_4933)
Accession : YP_001811596.1
Strain :
Genome accession: NC_010552
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2080140 - 2080889 bp
Length : 750 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4414 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGTTGCTCGACAACAAGACCATCATCGTGACCGGCGCGGCGTCGCCGCGCGGCATCGGCAAGGCCACTGCCCGCGCGCT
CGCCGCCCACGGCGCGCGCATTGCGATTCTCGACCTTCGTCGCGAAGACGCCGAGGCGGCTGCCGCCGAACTCGGGACGA
ACCATCTCGGGCTGGCTTGCGACGTGACCGATCGCGATGCGTGCGTGGCCGCGGCCCGCGCGACGCTGGAGCACTATGGG
CGCATCGACGGCCTCGTGAACAACGCCGGCATCACGCAGCCCGTGCGCACGCTGGACATCTCCGGGCGCGACTTCGATGC
GATCGTCGACGTGAACCTGCGCGGCACGCTGTACATGTCGCAAGCGGTGCTGCCCGCGATGAAGGAGCAGCGGGGCGGCA
GCATCGTCTGCATGTCGTCGGTGTCCGCGCAGCGCGGCGGCGGCATCTTCGGCGGGCCGCACTACAGCGCCGCCAAGGCC
GGCGTGCTTGGCCTCGCGAAGGCGATGGCACGTGAATTCGGCGCCGACCATATCCGTATCAATTCGATCACGCCGGGCCT
GATCCAGACCGACATCACCGGGGACAAGCTGACGCCGGAAATGCGCGAGGAGATCATCAAGGGCATTCCGCTCGGCCGCC
TCGGCGATGCCGCCGATGTCGCCAATGCGTGCCTGTTCCTGCTGAGCGACCTGTCGAGCTACCTGACGGGCATCACGCTC
GACGTCAATGGCGGGATGCTGATTCACTGA

Protein sequence : 
MLLDNKTIIVTGAASPRGIGKATARALAAHGARIAILDLRREDAEAAAAELGTNHLGLACDVTDRDACVAAARATLEHYG
RIDGLVNNAGITQPVRTLDISGRDFDAIVDVNLRGTLYMSQAVLPAMKEQRGGSIVCMSSVSAQRGGGIFGGPHYSAAKA
GVLGLAKAMAREFGADHIRINSITPGLIQTDITGDKLTPEMREEIIKGIPLGRLGDAADVANACLFLLSDLSSYLTGITL
DVNGGMLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-61 71
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-61 71
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 4e-62 71
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-61 70
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-61 70