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Name : BamMC406_4861 (BamMC406_4861) Accession : YP_001811526.1 Strain : Genome accession: NC_010552 Putative virulence/resistance : Unknown Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 1999479 - 2001818 bp Length : 2340 bp Strand : + Note : PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bam:Bamb_4345 lysine decarboxylase DNA sequence : ATGACCGCTACCTTGACCCAACCGGCATTTCGCCGCCTCGGCATGAAGGCGCTGCTCGTGCAGCACGACATCGATGAACG CACGGCCACCGGGCGCGCAGCCACCGCCCTCGCCGAAGAATTGCGCGCACGGCTGGTCGACGTCGTGATCGCGACGTCCG CCGAAGACGCGCGCGCGGTGGTCGACGCCGATCCCGCGATCCAGTGCCTGCTGCTCAACTGGGAGCTCGGCAACGATCCC GAGCATGCGCCCGCGCGGGCCGTGCTCGACGCGATGCGCGCGCGCAATGCGACGGTGCCGGTGTTCCTGCTCGCGAGCCG CGCGAGCGCGGCCGCGATTCCCGTCGACGCGATGCGCAAGGCCGACGACTTCATCTGGATGCTGGAGGACACCACCGCGT TCATCGGCGGGCGGATCGTCGCCGCGATCGAACGCTATCGCGAGACCGTGCTGCCGCCGATGTTCCGCGCACTCGCGCAG TTCTCGCGCGTGTACGAATACTCGTGGCACACGCCGGGCCATACGGGCGGCACCGCGTTCCTGAAATCGCCGGTCGGCCG CGCGTACTTCGAATTCTTCGGCGAAGCGCTGTTCCGCTCGGACCTGTCGATCTCGGTCGGCGAACTCGGCTCGCTGCTCG ACCACTCGGGCCCGATCGGCGAAAGCGAACGCTACGCGGCGCGCGTGTTCGGCGCGCACCGCACGTATCACGTGACGAAC GGCTCGTCGATGTCGAACCGCGTGATCCTGATGGCGAGCGTCACGCGCAACCAGGTCGCGCTGTGCGACCGCAACTGCCA CAAGTCGGCCGAGCACGCGATGACGATGTCGGGCGCGATTCCGACCTACCTGATCCCGTCGCGCAACCATTACGGGATCA TCGGGCCGATCATGCCGGAACGGCTCACGGCCGCCGCCGTGCGCCTCGCGGTCGACGCGAATCCGCTCGTGCGCGGCCGC GACGGCATCGATCCGACGCCCGTGCATGCGCTGATCACGAACTCGACCTACGACGGCCTCTGCTACAACGTCGCGCGCGT CGAGGAATTGCTCGGCCAGAGCGTCGACCGGCTGCATTTCGACGAAGCCTGGTACGGCTATGCGCGCTTCAACCCGATCT ACCGCGACCGTCACGCGATGCACGGCGATCCGTCGCAGCACGACGCGAGCAAGCCGACCGTGTTCGCGACGCAATCGACG CACAAGCTGCTCGCCGCGCTGTCGCAGGCATCGTTCATCCATGTCCGCAACGGCCGCAACCCGATCGAGCATGCACGTTT CAACGAGGCGTACATGATGCACGCGTCGACGTCGCCGAACTACGCGATCATCGCGTCGAACGACGTGAGCGCCGCGATGA TGGACGGTCCCGGCGGCGAGGCGCTGACGACCGACGCGATCCGCGAGGCCGTGTCGTTTCGCCGGATGCTCGCGCGGCTG CACGCGGAATGCGAGGAGAACAACGACTGGTTCTTCAACGGCTGGCAGCCGGACACCGTGGTCGATCGCAAGACGGGCCG GCGCGTGCGCTTCCATGAAGCGGACGAAACGCTGCTCGCCACCGATCCGTCATGCTGGGTGCTGCATCCGGGCGACACCT GGCACGGCTTCGGCGAGATCGAGGACGACTACTGCATGCTGGACCCGATCAAGGTATCGATCGTCACGCCGGGCGTCGCG CCGCACGGCGGCCTGATGCCGGTCGGCATTCCGGCGTCGGTCGTCACGGCGTATCTCGACCGGCACGGGATCGTCGTCGA GAAGACGACCGACTTCACGATCCTGTTCCTGTTCTCGCTCGGCGTGACGAAGGGCAAGTGGGGCACGCTCGTCAACACGC TGCTCGACTTCAAGCGCGACTACGACGCGAACGCGCCGCTCGAACAGGCGCTGCCGGACCTCGTCGCGCGTTATCCGGAC CGCTACGGCAAGCTCGGCCTGCGCGAGCTGTGCGACCTGATGTTCAGCGCAATGAGCGACCTGAAGACGACCGAGATGAT GTCGCGCGGCTTCTCGACGCTGCCGCAGCCCGACTTCAGCCCGGCCGAGGCGTTCGAGCATCTCGTGCACAACGACATCG AGATGCTCGAGCTGTCGGAGATGGCCGGCCGCACCGTCGCGACGGGCGTCGTGCCCTACCCGCCCGGCATTCCGCTGCTG ATGCCCGGCGAGAACGCGGGGCCGGCCGACGGGCCGCTGCTCGGCTACCTGCGGGCGCTCGAGCAATTCGACCTGCGCTT CCCCGGCTTCACGCACGATACGCACGGCGTCGAAGTCGAGGACGGCGTGTACCGGATCGCCTGCATCCGGCAAGTCGATC GCAAGACCAACACGCGCTGA Protein sequence : MTATLTQPAFRRLGMKALLVQHDIDERTATGRAATALAEELRARLVDVVIATSAEDARAVVDADPAIQCLLLNWELGNDP EHAPARAVLDAMRARNATVPVFLLASRASAAAIPVDAMRKADDFIWMLEDTTAFIGGRIVAAIERYRETVLPPMFRALAQ FSRVYEYSWHTPGHTGGTAFLKSPVGRAYFEFFGEALFRSDLSISVGELGSLLDHSGPIGESERYAARVFGAHRTYHVTN GSSMSNRVILMASVTRNQVALCDRNCHKSAEHAMTMSGAIPTYLIPSRNHYGIIGPIMPERLTAAAVRLAVDANPLVRGR DGIDPTPVHALITNSTYDGLCYNVARVEELLGQSVDRLHFDEAWYGYARFNPIYRDRHAMHGDPSQHDASKPTVFATQST HKLLAALSQASFIHVRNGRNPIEHARFNEAYMMHASTSPNYAIIASNDVSAAMMDGPGGEALTTDAIREAVSFRRMLARL HAECEENNDWFFNGWQPDTVVDRKTGRRVRFHEADETLLATDPSCWVLHPGDTWHGFGEIEDDYCMLDPIKVSIVTPGVA PHGGLMPVGIPASVVTAYLDRHGIVVEKTTDFTILFLFSLGVTKGKWGTLVNTLLDFKRDYDANAPLEQALPDLVARYPD RYGKLGLRELCDLMFSAMSDLKTTEMMSRGFSTLPQPDFSPAEAFEHLVHNDIEMLELSEMAGRTVATGVVPYPPGIPLL MPGENAGPADGPLLGYLRALEQFDLRFPGFTHDTHGVEVEDGVYRIACIRQVDRKTNTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 4e-124 | 41 |
