Gene Information

Name : BamMC406_4641 (BamMC406_4641)
Accession : YP_001811311.1
Strain :
Genome accession: NC_010552
Putative virulence/resistance : Virulence
Product : extracellular solute-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4588
EC number : -
Position : 1753840 - 1754616 bp
Length : 777 bp
Strand : -
Note : PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_3765 hypothetical protein

DNA sequence : 
ATGTCATTGGCAATCCTCACGTTGTCGTGCGGCGCGTTAGCGCATGAAACGCCCGATCCGACGATACGGCACGATGCGCG
AGACGGCATCGTGCGTTTGTACGGCGCAGGCGGCCCGGATACCGCATTCGCGAAAGTCGCGAAGGTCTTCACTGACGAAA
CGGGTATCAAGGTGGAGGTGACTGGCGGACCGGAGCCGACGTGGAGCCGAAAAGCGCAAGCCGATGCCGATATTCTGTGG
GGGACGTCGGAAGAAGATATGGCCGGCCTCCTCGAAACCTACCAGGTGTTTCGATGGAGCGACGTGACGCCGATCTATAT
CCGGCCGGCCGTCATCGCCGTGAAGAAAGGCAATCCGAAACACATCCGCGGCTTCGACGATCTGCTCGCGGATGGCGTGC
GTATCGTCGTCACGGAAGGCGCGGGCGCGGCGAATACGTCGGGCACGGGCACGTGGGAGGACATCGCCGGCCGCATGGGG
CGTCTTGACGACGTCAGGCGGTTCAGGAAGAACATCGTCGGATCCGGCAAGGGCAGTGGGCCGAGCTTCAGGATGTTCGT
CGACAAGGACGCGGATGCCTGGATCACGTGGCCCGACTGGCCGATCACGCATGCCGACAAAGCCGATTACGTCAGCCTGC
CCGCGAACAGAGCGATCTGGAGAGACGTCAATGTTGCGCTCGCTCCGGATGCCGATCCTGAGGCAACGCAGTTCCTCGAT
TTCCTGAACAGCGATCGCGGAGCCGCAATCATGAAGACCGAGGGATGGGTGCGCTGA

Protein sequence : 
MSLAILTLSCGALAHETPDPTIRHDARDGIVRLYGAGGPDTAFAKVAKVFTDETGIKVEVTGGPEPTWSRKAQADADILW
GTSEEDMAGLLETYQVFRWSDVTPIYIRPAVIAVKKGNPKHIRGFDDLLADGVRIVVTEGAGAANTSGTGTWEDIAGRMG
RLDDVRRFRKNIVGSGKGSGPSFRMFVDKDADAWITWPDWPITHADKADYVSLPANRAIWRDVNVALAPDADPEATQFLD
FLNSDRGAAIMKTEGWVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 4e-36 44
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 4e-36 44
acfC AAA82706.1 AcfC Virulence VPI Protein 4e-36 44
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 6e-36 44
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 6e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_4641 YP_001811311.1 extracellular solute-binding protein VFG0105 Protein 2e-36 44
BamMC406_4641 YP_001811311.1 extracellular solute-binding protein VFG0839 Protein 9e-36 41