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Name : BamMC406_0776 (BamMC406_0776) Accession : YP_001807488.1 Strain : Genome accession: NC_010551 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 866096 - 867979 bp Length : 1884 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bam:Bamb_0765 polys DNA sequence : ATGTTGCGATCCAAAGCATCGTGGCTGTCGCTGAGTGCTTTCCTGTTCGACCTGACGGCGGTGGTCGCGTCGTGGTTGTT CGCTTATCTCGTTCGTTTCAACGGTAGCGTTCCGGCTGATTTCCTCGGCGGCGCGGTGACCGCGCTTGTCTGGACGCTGC CGGTCTACGCGCTGATGTTCCATGTGTTCGGCCTGTATCGCGGCCTCTGGGTGTTCGCGAGCCTTCCCGACCTGATGCGG ATCTCGAAGGCGGTTGCCGGCGGCAGCGTGATCGTGATGATCGGGGCCGTGATGTTCCAGCCGACACCGATCATCCCGCG CTCGGTGCTGCTCGTCTCACCGCTGATGCTGTTCCTGTTGATGGGCGGCGCCCGCGCGCTGTACCGCGCGACGAAGGAGT TCTACCTGTACGGCGGCCTCGTCGGACAGGGCAAGCCCGTGCTGGTGCTCGGCGCCGGCACGGCTGGCGCCAGCCTCGCG CGCGAGTTGTCGCGTTCGGGCGAATGGCGTCTGGTCGGCCTGCTCGACGACGACGTCACCAAGCATGGGCGCGAGATCTA CGGCTACAAGGTGCTCGGCTCGTTCAACGACCTGAAGCACTGGACCGACGCGATCAAGGTCGAATACGCGATCATCGCGA TTCCGTCGGCGTCCGTCGAAACGCAGCGCCGCGTCGCGACGCTGTGCGTGCGCGCCGGCATCAAGGCGATGGTGCTCCCG TCGCTGACCGCACTGATGCCCGGGCAGGGGTTCCTGTCGCAGGTGCGCAATATCGACCTCGAGGATTTGCTCGGCCGCGA CGCGGTGACGATCGACACGCCGCACGTCGAGGCGCTGCTGCGGGGGCGCGTCGTGATGGTGACGGGCGCGGGCGGTTCGA TCGGCTCCGAGCTGTGCCGCCAGATCCTGCGTTTTGCACCTGCGCAGATCGTCGCGTTCGATCTGTCCGAATACGCGATG TATCGGCTTACCGAGGAGTTGCGGGAACGCTTCCCCGACCAGCCCGTCGTGCCGATCATCGGCGATGCGAAGGATTCGTT GCTGCTCGACCAGGTGATGTCGCGCCATGCGCCGCACATCGTGTTCCATGCGGCCGCATACAAACACGTGCCGTTGATGG AGGAGCACAACGCGTGGCAGGCGCTGCGCAACAACGTGCTCGGCACATATCGGGTCGCGCGTGCCGCGATTCGCCACGAT GTTCGCCACTTCGTGCTGATCTCGACCGACAAGGCCGTCAACCCGACCAACGTCATGGGCGCGAGCAAGCGTCTCGCCGA GATGGCGTGCCAGGCGTTGCAGCAAACGAGCGGCGGCACGCAGTTCGAGACCGTGCGGTTCGGCAACGTGCTCGGCAGCG CGGGCAGCGTGATCCCCAAGTTCCAGCAGCAGATCGCGAAGGGCGGCCCGGTGACCGTCACGCATCCCGAGATCACGCGG TTCTTCATGACGATTCCGGAAGCGTCCCAACTCGTGCTGCAGGCGTCGAGCATGGGGCACGGCGGCGAGATATTCATTCT CGACATGGGCGAGCCCGTCAGGATCGTCGATCTCGCGCGCGACCTCATTCGTCTGTACGGCTTTTCGGAGGGACAGATCC GGATCGAGTTCACGGGGCTGCGACCCGGCGAAAAGCTCTATGAGGAACTGCTCGCGGACGACGAGACGACGACGCGCACG CCGCATCCCAAGCTGCGGATCGCGCGCGCGCGGGAAGTGCCGGATCACTTGCTCGACGAATTGCTGCCATGGCTGATGCA GAACCGGGTGCTGAGCGACGACGAAGTGCGGCGCGATCTGCGCCGCTGGGTGCCTGAATACCAGACGACGGTTGCTCCCG TGCTGCAGAGCGTGCCGGATGTTCGGACGGCGTCCAGCAAGTAG Protein sequence : MLRSKASWLSLSAFLFDLTAVVASWLFAYLVRFNGSVPADFLGGAVTALVWTLPVYALMFHVFGLYRGLWVFASLPDLMR ISKAVAGGSVIVMIGAVMFQPTPIIPRSVLLVSPLMLFLLMGGARALYRATKEFYLYGGLVGQGKPVLVLGAGTAGASLA RELSRSGEWRLVGLLDDDVTKHGREIYGYKVLGSFNDLKHWTDAIKVEYAIIAIPSASVETQRRVATLCVRAGIKAMVLP SLTALMPGQGFLSQVRNIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSIGSELCRQILRFAPAQIVAFDLSEYAM YRLTEELRERFPDQPVVPIIGDAKDSLLLDQVMSRHAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHD VRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSGGTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTHPEITR FFMTIPEASQLVLQASSMGHGGEIFILDMGEPVRIVDLARDLIRLYGFSEGQIRIEFTGLRPGEKLYEELLADDETTTRT PHPKLRIARAREVPDHLLDELLPWLMQNRVLSDDEVRRDLRRWVPEYQTTVAPVLQSVPDVRTASSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-90 | 43 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-89 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BamMC406_0776 | YP_001807488.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 5e-90 | 47 |
| BamMC406_0776 | YP_001807488.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 3e-82 | 47 |
