Gene Information

Name : BamMC406_0722 (BamMC406_0722)
Accession : YP_001807434.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Resistance
Product : D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1052
EC number : -
Position : 805592 - 806590 bp
Length : 999 bp
Strand : -
Note : PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bam:Bamb_0705 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding

DNA sequence :
GTGCGCGTGATCCTGTTCAGCAGCCGGCAGTACGACGACGAATCGTTTACCGCCGCCAACCGGCAGTTCGGCTATCGGCT
GCACTTCCAGCCGTCCCATCTCGACGCGGAAACCGCGATCCTCGCGCACGGCTATGAAGTCGTGTGTCCGTTCGTCAACG
ACACCGTCGACGCGGCCGTGCTCGAACGGCTCGCCGACGGCGGCACGCGCCTGATCGCACTGCGCTCGGCCGGCTTCAAC
CACGTCGACCTGGCCGCCGCCGAGCGGCTCGGCATCGCGGTCGTGCGCGTGCCGGCCTATTCGCCGCATGCGGTGGCCGA
ACACGCGGTCGCGCTGATCCTCGCGCTCAACCGCCGGCTGCCGCGCGCGGTCGCGCGCACGCGTGAAGGCGACTTCTCGC
TGAACGGCCTGCTCGGCTTCGACCTGCACGGCAAGACCGTCGGCGTGATCGGCACCGGCCTGATCGGCAGCGTGTTCGCG
AAGATCATGATGGGTTTCGGGATGCACGTGCTCGCGCACTCGATGCCGCCGTACGACGACGAGCTTATCGCGTTCGGCGC
GCGCTACGTCGAGCTCGACGAGCTGCTGCACCACGCCGACATCGTCAGCCTGCACTGCCCGCTGCTGCCATCGACGCACC
ATCTGATCAACGCGCAGACGCTCGCGCGGATGAAGCACGGCGCGATGCTGATCAATACGGGCCGCGGCGGCCTCGTCGAC
GCGCAGGCGCTGGTCGACGCGCTCAAGAGCGGCCAGCTCGGCCATCTCGGGCTCGACGTGTACGAGGAGGAAAGCGGCCT
CTTCTTCGAGGATCATTCCGACCTGCCGCTGCAGGACGACGTGCTCGCGCGCCTGCTGACGTTCCCGAACGTGATCGTCA
CGTCGCACCAGGCGTTCTTCACGCGCGAGGCGCTCGCCGAGATCGCGCACACGACGCTGCTGAACATCGAGGCATGGCGC
GCCGGTACGCCGACCAACGTCGTCACGGCCGGGCGCTGA

Protein sequence :
MRVILFSSRQYDDESFTAANRQFGYRLHFQPSHLDAETAILAHGYEVVCPFVNDTVDAAVLERLADGGTRLIALRSAGFN
HVDLAAAERLGIAVVRVPAYSPHAVAEHAVALILALNRRLPRAVARTREGDFSLNGLLGFDLHGKTVGVIGTGLIGSVFA
KIMMGFGMHVLAHSMPPYDDELIAFGARYVELDELLHHADIVSLHCPLLPSTHHLINAQTLARMKHGAMLINTGRGGLVD
AQALVDALKSGQLGHLGLDVYEEESGLFFEDHSDLPLQDDVLARLLTFPNVIVTSHQAFFTREALAEIAHTTLLNIEAWR
AGTPTNVVTAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanHB YP_008394258.1 VanH protein, D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 2e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_0722 YP_001807434.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit AF310956.2.orf4.gene Protein 3e-44 41