Gene Information

Name : BamMC406_0562 (BamMC406_0562)
Accession : YP_001807275.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 632544 - 634616 bp
Length : 2073 bp
Strand : +
Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo

DNA sequence :
ATGCCGCCGTGCCCCCGTTTTCTCGACTCGTTCTCCGGACTCGACATGACGACTTCGTCTCCCGCCTCTACCACTCTGAT
GGCCAACGCGATCCGTGCGCTCGCGATGGACGCCGTCCAGCAAGCGAACTCCGGCCACCCCGGCATGCCGATGGGCATGG
CCGAAATCGGCGTTGCGCTCTGGTCGCGCCACCTGAAGCACAACCCGACGAACCCGCACTGGGCAGACCGCGACCGTTTC
GTGCTGTCGAACGGCCACGGCTCGATGCTGCTGTACTCGCTGCTGCACCTGACCGGCTACGACCTGCCGATCGAAGAGCT
GAAGAACTTCCGCCAGCTGCACTCGAAGACGCCGGGCCACCCGGAATACGGCATCACGCCGGGCGTCGAGACGACCACCG
GCCCGCTCGGCCAGGGTCTCGCGAACGCGGTCGGCATGGCGCTCGGCGAAGCGCTGATGGCCGACGAGTTCAACCGTGAC
GGCGCGAAGATCGTCGATCACCACACGTACGTGTTCCTCGGCGACGGCTGCCTGATGGAAGGCATCTCGCACGAAGCCTG
CTCGCTCGCGGGCACGCTGAAGCTGAACAAGCTGATCGCGCTGTACGACGACAACGGCATCTCGATCGACGGCGACGTCG
TCAACTGGTTCCACGACGACACGCCGAAGCGCTTCGAGGCATACGGCTGGAACGTGATCCCGAACGTGAACGGCCACGAC
GTCGACGCGGTCGACGCGGCCATCGCGAAGGCGAAGCTGTCGGACAAGCCGACGCTGATCTGCTGCAAGACGGTGATCGG
CAAGGGCGCGGCGACCAAGGCCGGCGGCCACGACGTGCACGGCGCGGCGCTCGGCGCGGAAGAAATCGCGAAGACGCGCG
AAGCGCTCGGCTGGAAGTGGGAGCCGTTCGTGATTCCGCAGGAAGTCTATGCGGCGTGGGATGCGAAGGAAGCCGGCAAG
CGTGCCGAGACCGAATGGGACGCGACGTTCGCGCAATATCGCGAGAAATTCCCGGCGCAAGCCGCCGAATTCGAGCGCCG
GATGGCCAACCAGCTGCCGGCCGACTGGGCCGAGAAGGCCGCGGCGATCATCGCCGGCGCGAACGAGCGTGCCGAGACGG
TCGCGACCCGCAAGGCGTCGCAACAGGCCATCGAAGGGCTCGCCGCCGTACTGCCGGAACTGCTCGGCGGCTCGGCCGAC
CTGACCGGCTCGAACCTGACCAACTGGAAGGCATCGAAGGCGGTGCGCGCGAATCCGGAAGGCGCGGGCGTGCTGCTCGG
CAACCACATCAACTACGGCGTGCGCGAATTCGGCATGAGCGCTGCGCTCAACGGCCTCGCGCTGCACGGCGGCCACAAGC
CGTTCGGCGGCACGTTCCTGACGTTCTCCGACTACAGCCGCAACGCGCTGCGCGTCGCGGCGCTGATGAAGGTCCCGACG
ATCTTCGTGTTTACGCACGATTCGATCGGCCTCGGCGAAGACGGCCCGACGCACCAGTCGATCGAGCACGTGTCGAGCCT
GCGCCTGATCCCGAACCTCGACGTGTGGCGTCCGGCCGACACGGTCGAGACGGCCGTCGCATGGACCCACGCCGTGGCTG
CCGACCGTCCGTCGAGCCTGATCTTCAGCCGCCAGAACCTCGCGTTCAACCCGCGTACCGATGCGCAGATCGCGAACATC
GAGAAGGGCGGCTACGTGCTGAAGGACTGGGACGAAGAGATCGTCGCGCGCAAGATCATCCTGATCGCGACGGGCTCGGA
AGTCGAGCTCGCGATGAAGGCCGTCGAGCCCCTCGCGCAGCAGGGCATCGCGGCCCGCGTCGTGTCGATGCCGTCGACCA
ACGTGTTCGATCGCCAGGACGCCGAATACCGCGAACGCGTGCTGCCGCACGGCGTGCGCCGCGTCGCGATCGAAGCGGGC
GTGACGAGCTTCTGGCACAAGTACGTCGGCCTCGAAGGCGGCGTCGTCGGGATCGACACGTTCGGTGAATCGGCACCGGC
CGGCGTGCTGTTCAAGTACTTCGGCTTTACCGTCGAGCACGTCGTCGAGACCGCGAAGGCCGTGCTGGCCTGA

Protein sequence :
MPPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRF
VLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRD
GAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD
VDAVDAAIAKAKLSDKPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTREALGWKWEPFVIPQEVYAAWDAKEAGK
RAETEWDATFAQYREKFPAQAAEFERRMANQLPADWAEKAAAIIAGANERAETVATRKASQQAIEGLAAVLPELLGGSAD
LTGSNLTNWKASKAVRANPEGAGVLLGNHINYGVREFGMSAALNGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPT
IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNLDVWRPADTVETAVAWTHAVAADRPSSLIFSRQNLAFNPRTDAQIANI
EKGGYVLKDWDEEIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAG
VTSFWHKYVGLEGGVVGIDTFGESAPAGVLFKYFGFTVEHVVETAKAVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 64
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 60