Gene Information

Name : fliP (BamMC406_0038)
Accession : YP_001806756.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 48369 - 49130 bp
Length : 762 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAAACACGAATTCCTGCGTCGCGCGGCGCGCTTCGCGCCCGCGCTGATCCTCGGCCTCGCCCCCGCGCTCGCCTGCGC
GCAGGCGGCCGGCCTGCCCGCGTTCAACACGAGCCCGGGCCCGAACGGCGGCACCACCTATTCGCTGAGCGTGCAGACGA
TGCTGCTGCTCACGATGCTGTCGTTCCTGCCGGCGATGCTGCTGATGATGACGAGCTTCACGCGCATCATCATCGTGCTG
TCGCTGCTGCGCCAGGCGCTCGGCACCGCGACGACGCCGCCGAACCAGGTGCTGGTCGGACTCGCGATGTTCCTCACTTT
CTTCGTGATGTCGCCGGTGCTCGACCGTGCCTACGCCGATGGCTACAAGCCGTTCTCCGACGGCTCGATGCCGATGGAGC
AGGCCGTGCGGCGTGGCGTCGCGCCGTTCAAGACCTTCATGCTGAAGCAGACCCGCGAGACCGATCTCGCGCTGTTCGCG
AAGATCTCGAAGGCCGCGCCGATGCAGGGCCCGGAAGACGTGCCGCTGTCGCTGCTGGTGCCCGCGTTCGTCACGAGCGA
GCTGAAGACCGGCTTCCAGATCGGCTTCACGATCTTCATCCCGTTCCTGATCATCGACATGGTCGTCGCGAGCGTGCTGA
TGTCGATGGGGATGATGATGGTGTCGCCGTCCACCGTGTCGCTGCCGTTCAAGCTGATGCTGTTCGTGCTGGTCGACGGC
TGGCAGCTGCTGATCGGCTCGCTCGCGCAGAGCTTCGGTTAA

Protein sequence : 
MKHEFLRRAARFAPALILGLAPALACAQAAGLPAFNTSPGPNGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVL
SLLRQALGTATTPPNQVLVGLAMFLTFFVMSPVLDRAYADGYKPFSDGSMPMEQAVRRGVAPFKTFMLKQTRETDLALFA
KISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGMMMVSPSTVSLPFKLMLFVLVDG
WQLLIGSLAQSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 6e-25 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 4e-24 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-25 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 1e-25 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 1e-25 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-26 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-26 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 7e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001806756.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-82 92
fliP YP_001806756.1 flagellar biosynthesis protein FliP VFG2338 Protein 8e-63 69
fliP YP_001806756.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-54 60
fliP YP_001806756.1 flagellar biosynthesis protein FliP VFG2016 Protein 6e-50 54
fliP YP_001806756.1 flagellar biosynthesis protein FliP VFG0394 Protein 3e-23 42
fliP YP_001806756.1 flagellar biosynthesis protein FliP VFG0188 Protein 2e-24 42