Name : BamMC406_3012 (BamMC406_3012) Accession : YP_001809704.1 Strain : Genome accession: NC_010551 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3519 EC number : - Position : 3334586 - 3336466 bp Length : 1881 bp Strand : + Note : TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bte:BTH_II0136 bacterial protein of unknown function (DUF879) superfamily DNA sequence : ATGGATCCCAGATTTCTCGACCACTACAATCGCGAACTGACCTACATGCGCGAGCTGTCGGCGGAGTTCGCCGCACAGCA TCCGAAGATCGCCCGCCGGCTCGGCATGCACGGCATCGAAACGGCCGATCCTTACGTGGAGCGGATGATCGAAGCGTTCT GCTTCATGTCGGCGCGTACGCAGCTCAAGCTCGACGCCGAATTCCCGCGCTTTACGCAACGCCTGCTCGAGGTCGTGTAT CCGAACTACGTTGCGCCGACGCCGTCGATGGCCGTGGCGAAGCTACGCCCGAGCCTGCGCGAAGGCAACTTCAGCAAGGG CTTCACGGTGCCGCGCCACAGCGTATTGCGCTCGTCGATCCCACCAGGCGAACGGACCGCCTGCGAGTTTCGCAGCGGTC ATGAAATCACGCTTTGGCCGATCGAGATCGTCGACGCGAAGCTGACCGCCGTGCCGCCGGACCTTCCCGACCTGCAGCGC ATGCTGATGCCACACATGCGGCTGCGCGGCGCGCTTCGGTTGCGGCTGCGCACGGTCGGCGAAATCAAGTTCTCGCAGAT CAGCGGGCTCGACCGGCTGTCGCTCTATATCGGCGGCGACGAGCGGATCGCGTCGCATCTGTTCGAACTGGTCCATGCCG GCGGCATCGCGTCGGTCGTGCGCGCACACGGCGCTACCCGCGACGATTGCACGTTCGTCCCGAAGAATCCGGTCGATTTC GAGGGCCTGCGCCCCGACCAGAGCCTGTTGCCGCAAATGTGGAATACGTTCCACGGGCACAATCTGCTGCACGAGTACTT CACTTGTCGGCAGCGCTTCTATTTCTTCGTGCTTACGCAGTTGCAGGCCGGCCTTTCGAAGATCGACGGCAACGAAGCGG AAATCGTGCTACTGCTCGACCGACTGCCGGACGAGCTGACGGCCCACGTCGATGCGTCGAGCTTTCAGTTGTTCTGCACG CCGATCATCAACCTGTTTCCGCGACGCACCGACCGGATCGAGATCAATCGGGCGCTGACCGCGTTCCACCTGATTCCGGA CCGCAGCCGCCCACTCGACTATGAAGTCTTCTCGGTATCGCGGGTATTCGGCCAGAAAGCCGAAACGTCGACCGAAGTGA CGTTCAATCCGCTGTACCAGACGCTACACAGTGATATCGGCAATTACGGGCGTTACTTTTCGATTCTGCGCGAGCCGCGC GCGATGTCGGCCAACGCGCGCAAATACGGCACCCGCAGCGAGTACGTCGGCACCGAAGTATTCGTGTCGCTCGTCGATCA GGCCGAAGCGCCCTACGACGACGCGATCCGCTATCTGTCCGTCGACGCGTGGCTCACCAACCGCGACCTGCCGCGCCTGA TTCCGCGCAACGGGTTCAGCGACCTCACGATGCAGGACTCCGTGCCGATCGAAGGCGTGAGTCTCGTGCATCCGCCAAGC ACGCCGCGCGAGCCGTACGCGACCGGCGAAACCGCATGGCGGCTGATTCGCCAGTTGAGCTTCAACTACATGCCGCTCGC GGAGCTCGATCATCGCGACGGCGGCCAGGCCCTGCGCAACATGCTGCGACTGTTCGTCGGAACGAGCGAACACGAACAGC GCACGCAGATCGAGAGCCTCGTCGGCGCGCGCACCGAACCGGTCGTTCGACGCCTGCCCGGCCACGGGTTGCTCGTCTAC GGGCGCGGCGTACGCTGCGAACTGACCGTCGACGAGAGCGGCTTCTCCGGTGTGAGCCCCTATTTGTTCGGCCTTGTGCT CGAGCAGTACCTGGCGCGACACGTATCGATCAACGTCTTTACCGAGACGGAACTGCGCTCGATGCAACGCGGCGTCGTGA CACGCTGGAAGCCGCGCATGGGCGGACGGGGAGCGGTGTAA Protein sequence : MDPRFLDHYNRELTYMRELSAEFAAQHPKIARRLGMHGIETADPYVERMIEAFCFMSARTQLKLDAEFPRFTQRLLEVVY PNYVAPTPSMAVAKLRPSLREGNFSKGFTVPRHSVLRSSIPPGERTACEFRSGHEITLWPIEIVDAKLTAVPPDLPDLQR MLMPHMRLRGALRLRLRTVGEIKFSQISGLDRLSLYIGGDERIASHLFELVHAGGIASVVRAHGATRDDCTFVPKNPVDF EGLRPDQSLLPQMWNTFHGHNLLHEYFTCRQRFYFFVLTQLQAGLSKIDGNEAEIVLLLDRLPDELTAHVDASSFQLFCT PIINLFPRRTDRIEINRALTAFHLIPDRSRPLDYEVFSVSRVFGQKAETSTEVTFNPLYQTLHSDIGNYGRYFSILREPR AMSANARKYGTRSEYVGTEVFVSLVDQAEAPYDDAIRYLSVDAWLTNRDLPRLIPRNGFSDLTMQDSVPIEGVSLVHPPS TPREPYATGETAWRLIRQLSFNYMPLAELDHRDGGQALRNMLRLFVGTSEHEQRTQIESLVGARTEPVVRRLPGHGLLVY GRGVRCELTVDESGFSGVSPYLFGLVLEQYLARHVSINVFTETELRSMQRGVVTRWKPRMGGRGAV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
STY0289 | NP_454871.1 | hypothetical protein | Not tested | SPI-6 | Protein | 0.0 | 62 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
BamMC406_3012 | YP_001809704.1 | type VI secretion protein | VFG2074 | Protein | 1e-120 | 44 |