Gene Information

Name : BamMC406_2574 (BamMC406_2574)
Accession : YP_001809267.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2857390 - 2858118 bp
Length : 729 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_2700 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGAATTCTCATCGCCGAAGATGACAGCATACTCGCGGACGGCCTCACCCGGTCACTCCGCCAATCGGGCTATGCGGT
CGACCACGTGAAGAGCGGCGTCGACGCCGATACGGCGCTGTCGATGCAGACATTCGACCTGCTGATCCTCGATCTCGGGC
TGCCGAAAATGTCCGGGCTCGACGTGCTCAAGCGCCTGCGCGCCCGCAATTCCAACCTCCCCGTGCTGATCCTGACCGCC
GCCGACAGCGTCGACGAACGCGTGAAGGGGCTCGACCTCGGCGCCGACGATTACATGGCCAAGCCATTCGCGCTCAACGA
GCTGGAAGCGCGCGTGCGCGCGCTGACCCGGCGCGGCGCGGGCGGCGGCCCGACCGTCGTGCGCCACGGCTCGCTCGCGT
TCGACCAGGTCGGCCGCATCGCGTATGCGAACGATCACGTGCTCGATCTCTCCGCGCGCGAGCTCGGCCTGCTCGAGGTG
CTGCTGCAGCGGATCGGCCGGCTCGTGTCGAAGGAGCAGCTCGTCGATCATCTGTGCGAATGGGGCGAGGAAGTCAGCAA
CAACGCGATCGAAGTCTACGTGCACCGGCTGCGCAAGAAGATCGAACCGAGCGGCGTGCGGATCTCGACCGTGCGCGGCC
TCGGCTATTGCCTCGAGAAGGTCGCGCCCGCCGCGCCGGCCGATACGGCAGCGCCCCAGCCCGCGGTGGCCGGCACGCCG
CTGCGCTGA

Protein sequence : 
MRILIAEDDSILADGLTRSLRQSGYAVDHVKSGVDADTALSMQTFDLLILDLGLPKMSGLDVLKRLRARNSNLPVLILTA
ADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGAGGGPTVVRHGSLAFDQVGRIAYANDHVLDLSARELGLLEV
LLQRIGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEPSGVRISTVRGLGYCLEKVAPAAPADTAAPQPAVAGTP
LR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_2574 YP_001809267.1 two component transcriptional regulator BAC0487 Protein 8e-37 44
BamMC406_2574 YP_001809267.1 two component transcriptional regulator BAC0083 Protein 4e-36 44
BamMC406_2574 YP_001809267.1 two component transcriptional regulator BAC0638 Protein 7e-30 44
BamMC406_2574 YP_001809267.1 two component transcriptional regulator BAC0308 Protein 3e-31 41
BamMC406_2574 YP_001809267.1 two component transcriptional regulator BAC0197 Protein 2e-33 41
BamMC406_2574 YP_001809267.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_2574 YP_001809267.1 two component transcriptional regulator VFG0473 Protein 2e-41 44
BamMC406_2574 YP_001809267.1 two component transcriptional regulator VFG1390 Protein 1e-35 42