Name : xerD (BamMC406_2478) Accession : YP_001809172.1 Strain : Genome accession: NC_010551 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 2753567 - 2754535 bp Length : 969 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGAGTGAACCGTTGCTTTCCCCCGACTCCGCGTCCGACACCGATACCGCTGGCGACGCGGCCGCCGCATCGCCCGTGCT GCTCGCGAGCCGCGCGTCGATCGACGTGTTCTGCGATGCGCTGTGGCTCGAACACGGGCTCGCGCGCAATACGCTCGATG CGTACCGGCGCGATCTGGTGCTGTTTTCGCAATGGCTGGCCGCGATGCACGACGCGCCGCTCGACTCGGCCGACGAAGCG ATGTTGATCGGCTACATCGCCGCGCGCAGCGACGGCAAGGCGACATCGTCGAACCGGCGCTTGTCGGTGTTCCGGCGCTA TTACGGCTGGGCCGTGCGCGAGCATCGCGCGAATGCGGACCCGACGCTGCGGATCACGTCGGCGAAGCAGGCCGCGCGGT TTCCGTCGACGCTGTCCGAGGCGCAGGTCGAGGCGCTGCTCGGTGCACCCGACGTCGGCACGCCGCTCGGCCTGCGCGAT CGCACGATGCTCGAGCTGATGTATGCAAGCGGGCTGCGCGTGAGCGAGCTCGTCACGCTGAAGACCGTCGAGGTCGGGCT CAACGAGGGCGTCGTGCGCGTGATGGGCAAGGGCTCGAAGGAACGGCTCGTGCCGTTCGGCGAAGTCGCGCACGGCTGGA TCGAGCGCTACCTGCGCGACGCGCGGCCGGCGCTGCTCGGCGCACGCGCGGCCGACGCGCTGTTCGTGACCGCGCGCGGC GACGGGATGACGCGCCAGCAGTTCTGGAACATCATCAAGCGTCACGCGCAGCAGGCCGACGTGCGCGCGCACCTGTCGCC GCATACGCTGCGGCACGCGTTCGCGACGCACCTGCTGAACCACGGCGCCGACCTGCGCGTCGTGCAGCTGCTGCTCGGTC ACAGCGATATCTCGACCACGCAGATCTACACGCACGTCGCGCGCGAGCGGCTCAAGACGCTGCACGCGACGCACCATCCG CGCGGCTAG Protein sequence : MSEPLLSPDSASDTDTAGDAAAASPVLLASRASIDVFCDALWLEHGLARNTLDAYRRDLVLFSQWLAAMHDAPLDSADEA MLIGYIAARSDGKATSSNRRLSVFRRYYGWAVREHRANADPTLRITSAKQAARFPSTLSEAQVEALLGAPDVGTPLGLRD RTMLELMYASGLRVSELVTLKTVEVGLNEGVVRVMGKGSKERLVPFGEVAHGWIERYLRDARPALLGARAADALFVTARG DGMTRQQFWNIIKRHAQQADVRAHLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKTLHATHHP RG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-59 | 54 |
BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-59 | 54 |