Gene Information

Name : BamMC406_0230 (BamMC406_0230)
Accession : YP_001806947.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 265678 - 266376 bp
Length : 699 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_0222 ABC transporter related

DNA sequence : 
GTGAACGACGCCTCGCCTCCCCTCGTCGAGATCAGCCACGTCGCGAAGTCGTACCGGCGCGGCAATCAGGTCGTGCCGGT
GCTGACCGACATCACGCTCGACATCGGCGAAGGCGACTTCGTCGCGCTGATGGGGCCGTCGGGTTCCGGCAAGAGCACGC
TGCTCAATCTCGTCGCCGGCATCGACCGGCCCGACAGCGGCGAGCTGCGCGTGGGCGGCCTCGACATCTCGCGGCTCGAG
GAGGCGCAGCTGGCCGAATGGCGCGCGGCGAACGTCGGCTTCATCTTCCAGTTCTACAACCTGATGCCCGTGCTCACCGC
ATTCGAGAACGTCGAGCTGCCGCTGATGCTCACGCACCTGTCGCGCCGCGAACGGCGCGAGCGCGTCGAGCTGGTACTCG
ACATGGTGAACCTCGGCGACCGGACCAGTCATTACCCGTCCGAGCTGTCGGGCGGCCAGCAGCAGCGCGTCGCGATCGCG
CGCGCGCTGATCACCGATCCGGTGCTGATCGTCGCCGACGAGCCGACCGGCGACCTCGACCGCGCGTCGGCCAGCGACGT
GCTCTCGATGCTGCAGCGGATGAACGCCGAGCTCGGCAAGACGATCATCATGGTGACCCACGATGCGCACGCGGCCGGCG
CCGCGCAGTCGCTCGTGCATCTGGAAAAAGGGGAGCTAACCGATGGGCACGCCGTCTGA

Protein sequence : 
MNDASPPLVEISHVAKSYRRGNQVVPVLTDITLDIGEGDFVALMGPSGSGKSTLLNLVAGIDRPDSGELRVGGLDISRLE
EAQLAEWRAANVGFIFQFYNLMPVLTAFENVELPLMLTHLSRRERRERVELVLDMVNLGDRTSHYPSELSGGQQQRVAIA
RALITDPVLIVADEPTGDLDRASASDVLSMLQRMNAELGKTIIMVTHDAHAAGAAQSLVHLEKGELTDGHAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_0230 YP_001806947.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-43 47
BamMC406_0230 YP_001806947.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-37 47
BamMC406_0230 YP_001806947.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-38 43