Gene Information

Name : BamMC406_2023 (BamMC406_2023)
Accession : YP_001808720.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2254285 - 2254980 bp
Length : 696 bp
Strand : -
Note : KEGG: bam:Bamb_2150 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCAGGAATACGTGCTTCAGGCGCGCGGGATCACGAAGGCGTTCGTGCAAGGCGGCTTCAATGTGCAGGTGCTCAACGA
CACCGAGCTGACGGTGCGGCGTGGCGAGAAGCTCGCGGTCGTCGGCGCGTCGGGCTCCGGCAAGAGCACGCTGCTGCACG
TGCTGGGCGGCCTCGACGAACCGAGCGCGGGCGAAGTGTCGCTGCTCGGCAAGCCGTTTACGCAGCTCGCCGAGCGCGAG
CGCAACGAGTTGCGCAATCGCGCGCTCGGGTTCGTCTATCAGTTCCATCACCTGCTGCCGGAATTCACCGCGCTCGACAA
CGTCGCGATGCCGCTGCGCATTCGCCGGATGACGACGGAGGATGCGCGCGAGCAGGCACAGGCGATGCTCGAGCGGGTCG
GTCTCGGCCCGCGTGCGAAGCATCGGCCGGGCGAGCTGTCGGGCGGCGAGCGGCAGCGCGTCGCGATCGCGCGCGCGCTG
GTGACGAAGCCGGCCTGCGTGCTCGCCGACGAGCCGACCGGCAACCTCGACGGCACGACGGCCGATACGGTGTTCAACCT
GATGCTCGAATTGTCCGAGACACTCGAAACGAGTTTCGTGATCGTCACGCACGACCCCGAGCTCGCGGCGCGCTGCGACC
GCATCATGCGCTTGCGCGACGGCGTACTGCACGAGGAGCCGGCGCTGCCGGTGTGA

Protein sequence : 
MQEYVLQARGITKAFVQGGFNVQVLNDTELTVRRGEKLAVVGASGSGKSTLLHVLGGLDEPSAGEVSLLGKPFTQLAERE
RNELRNRALGFVYQFHHLLPEFTALDNVAMPLRIRRMTTEDAREQAQAMLERVGLGPRAKHRPGELSGGERQRVAIARAL
VTKPACVLADEPTGNLDGTTADTVFNLMLELSETLETSFVIVTHDPELAARCDRIMRLRDGVLHEEPALPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_2023 YP_001808720.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 3e-29 45
BamMC406_2023 YP_001808720.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 1e-32 42