Gene Information

Name : BamMC406_1709 (BamMC406_1709)
Accession : YP_001808410.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1908896 - 1911337 bp
Length : 2442 bp
Strand : +
Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bcn:Bcen_6281 RNA binding S1

DNA sequence :
ATGGCAAAATGCCCCGCTTCACTCACCCGCGGCATCTGGTCCGGCGGGCCCGTCTCGCAGCCCGCCGCGCGGTCTGCCGG
CCCGCGCCGCGATTTCAGCAGGCACATCATCCACGACATGACGGAAACCGTAGCACTCAAGATCGTACAGCGCATCGCCA
CCGAACTGTCCGTCCAGCCGCGCCAGGTCGCGGCGGCCGTGCAACTCCTCGACGAAGGCTCGACCGTTCCGTTCATTGCC
CGGTACCGCAAGGAAGTGACGGGCAACCTGGACGACACGCAGCTGCGCCAGCTCGAGGAGCGCCTCCTGTATCTGCGCGA
ACTGGAGGATCGCCGCGCGACGATCCTGTCGAGCATCGACGAACAGGGCAAGCTGACCGACGAACTGCGCGCCGCGATCG
ACGCGGCCGACAGCAAGCAGGTGCTCGAAGACCTTTATCTGCCGTACAAGCCGAAGCGCCGCACGCGCGCGCAGATCGCC
CGCGAAGCCGGCCTCGAGCCGCTCGCGCAGGCGCTGCTCGCGAATCCGCTGCTCGACCCGCAGGCGGAAGCCGCCGCGTA
CGTCGACGCCGACAAGGGTGTCGCCGACGTGAAGGCCGCGCTCGACGGCGCGCGCGACATCCTGTCCGAACAGTTCGGCG
AAACGGCCGAACTGCTCGGCAAGCTGCGCGACTATCTGCACAGCCAGGGCGTCGTGTCGTCGGCCGTGGTCGAGGGCAAG
GAAAACGAGGAAGGCGAGAAGTTCCGCGACTACTACGACTACGCGGAGACGATCCGGACCGTGCCGTCGCACCGCGCGCT
CGCGCTGTTCCGCGGCCGCAACGCCGGCGTGCTGACCGTCAAGCTCGGCCTCGGCGAGGAACTCGACGCGCAGGTTCCGC
ATCCCGGCGAAGCGATGATCGCGCGCCATTTCGGGATCGCGAACCAGAACCGTCCCGCCGACAAGTGGCTGTCGGACGTG
TGCCGCTGGTGCTGGCGCGTGAAGGTGCAGCCGCACATCGAGAACGAACTGCTCACGCAACTGCGTGAAACGGCGGAAGC
CGAGGCGATCCGCGTGTTCGCGCGCAACCTGAAGGATCTGCTGCTGGCCGCGCCGGCCGGCCCGAAGGCCGTGATCGGTC
TCGACCCCGGCTTGCGCACGGGCGTGAAGGTCGCCGTGGTCGACCGCACCGGCAAGCTGCTCGCGACCGACACGATCTAC
CCGCACGAGCCGCGCCGCGACTGGGACGGCTCGCTCGCGAAGCTCGCGCGCATCGCCGCGCAGACGCAGGCCGAGCTGAT
CAGCATCGGCAACGGCACCGCGTCCCGTGAAACCGACAAGCTCGCGAGCGAGCTGATCTCGAAGCACCCAGAACTGCGGC
TGCAGAAGATCGTCGTGTCGGAAGCCGGCGCGTCCGTCTACTCGGCGTCGGAGCTGGCCGCGAAGGAATTCCCGGAACTC
GACGTGTCGCTGCGCGGCGCCGTGTCGATCGCGCGCCGTCTGCAGGATCCGCTCGCCGAACTCGTGAAGATCGAGCCGAA
GGCGATCGGCGTCGGCCAGTACCAGCACGACGTGAACCAGCGCGAACTCGCCCGCTCGCTCGACGCGGTCGTCGAGGATT
GCGTGAACGCGGTCGGCGTCGACGCGAATACCGCGTCGGTCGCGCTGCTCGCACGCGTATCTGGCCTGAACGCGACGCTC
GCGCGCAACATCGTCGACTATCGCGACGCGAACGGGCCGTTCCCGTCGCGCGACCATCTGCGCAAGGTGCCGCGTCTCGG
CGACAAGACCTTCGAACAGGCGGCGGGCTTCCTGCGCATCAACGGCGGCGAGAATCCGCTCGACCGCTCGTCGGTCCACC
CGGAGGCCTATCCGGTCGTCGAACGGATCCTCGCGAAGATCAACAAGCGCATCGACGACGTCCTCGGCAGCCGCGACGCG
CTGTCCGGACTGTCGCCGACGGAATTTGTTGACGAACGTTTCGGCCTGCCGACCGTGCGCGACATCCTGTCCGAGCTCGA
AAAACCGGGTCGCGACCCGCGGCCCGAATTCAAGACCGCAACGTTCCGCGACGGCGTCGAGAAGGTGTCCGACCTGATGC
CCGGCATGCTCCTCGAAGGGGTCGTGACGAACGTCGCGGCGTTCGGCGCGTTCGTGGATATCGGCGTGCACCAGGACGGC
CTCGTCCACGTGTCCGCGATGTCGACGAAGTTCATCAAGGATCCGCACGAAGTCGTGAAGGCCGGCCAGGTCGTCAAGGT
CAAGGTGCTCGACGTCGACGTGAAGCGCCAGCGCATTGCGCTGACCATGCGCCTCGACGACGAAGCGGCCGCGCCCGGCA
TGGCGCCGCGCGGCAGCCAGGATCGCGGCAATGCCGGCCGCGGCGCGGCCCGCCCGCAGCGTTCGCGCGAGCCGGAACCG
GCCGGTGCGATGGCCGCGGCGTTCGCGAAGCTGAAGCGCTGA

Protein sequence :
MAKCPASLTRGIWSGGPVSQPAARSAGPRRDFSRHIIHDMTETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIA
RYRKEVTGNLDDTQLRQLEERLLYLRELEDRRATILSSIDEQGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQIA
REAGLEPLAQALLANPLLDPQAEAAAYVDADKGVADVKAALDGARDILSEQFGETAELLGKLRDYLHSQGVVSSAVVEGK
ENEEGEKFRDYYDYAETIRTVPSHRALALFRGRNAGVLTVKLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDV
CRWCWRVKVQPHIENELLTQLRETAEAEAIRVFARNLKDLLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTIY
PHEPRRDWDGSLAKLARIAAQTQAELISIGNGTASRETDKLASELISKHPELRLQKIVVSEAGASVYSASELAAKEFPEL
DVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVDANTASVALLARVSGLNATL
ARNIVDYRDANGPFPSRDHLRKVPRLGDKTFEQAAGFLRINGGENPLDRSSVHPEAYPVVERILAKINKRIDDVLGSRDA
LSGLSPTEFVDERFGLPTVRDILSELEKPGRDPRPEFKTATFRDGVEKVSDLMPGMLLEGVVTNVAAFGAFVDIGVHQDG
LVHVSAMSTKFIKDPHEVVKAGQVVKVKVLDVDVKRQRIALTMRLDDEAAAPGMAPRGSQDRGNAGRGAARPQRSREPEP
AGAMAAAFAKLKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 63