Gene Information

Name : BamMC406_1105 (BamMC406_1105)
Accession : YP_001807812.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1217336 - 1219267 bp
Length : 1932 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAACGCCAATCCGAAGTTTCTGTCCGCCGACGCCCACGTCGATGCCGCTGCCGTCGCGCCGCTGCCCAATTCGCGAAA
GGTTTATGTAACCGGCTCGCAGCCCGACATCCGCGTGCCGATGCGTGAAATCACGCAGGCCGACACGCCGACCGGCTTCG
GCGGCGAAAAGAATCCGCCGATCTACGTGTACGACACGTCGGGCCCGTACACCGATCCGGACGCCAAGATCGACATCCGC
GCGGGCCTGCCCGCGCTGCGCCAGGGCTGGATCGAAGCGCGCGGCGACACCGAAGTGCTCGACGGCCTGTCGAGCCAGTA
CGGCCTCGAGCGCGCGGCCGACCCGGCCACCGCCGACCTGCGTTTTCCGGGCCTGCACCGCAACCCGCGCCGTGCGCAGC
CGGGCAAGAACGTCACGCAGATGCACTACGCGCGTCAGGGCATCATCACGCCGGAAATGGAATACATCGCGATCCGCGAG
AACCAGCGCCGCGCCGAGTACATCGAGAGCCTGAAGTCGAGCGGCCCGAATGGCGCGAAGCTCGCCGCGATGATGGGCCG
CCAGCACCCGGGCCAGGCGTTCGGCGCCGCGGCCTTCGGCGCGAACGCGCTCGCCGAGATCACCCCCGAGTTCGTGCGCG
ACGAAGTCGCGCGCGGCCGCGCGATCATCCCCGCGAACATCAACCACCCGGAATCCGAGCCGATGATCATCGGCCGCAAC
TTCCTCGTGAAGATCAACGCGAACATCGGCAACTCGGCCGTCACGTCGTCGATCGGCGAGGAAGTCGACAAGATGACGTG
GGCGATCCGCTGGGGCGGCGACACCGTGATGGACCTGTCGACCGGCAAGCACATCCATGAAACGCGCGAGTGGATCATCC
GCAACAGCCCAGTGCCGATCGGCACGGTGCCGATCTACCAGGCGCTCGAAAAGGTCAACGGCAAGGCAGAGGATCTCACC
TGGGAAATCTTCCGCGACACGCTGATCGAGCAGGCCGAGCAAGGCGTCGACTACTTCACGATCCATGCGGGCGTGCGGCT
GCAGTACGTGCCGCTCACCGCGAACCGGATGACGGGCATCGTGTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTCG
CGCATCACAAGGAAAGCTTCCTGTACGAACACTTCGAAGAGATCTGCGAGATCATGAAGGCGTACGACGTGAGCTTCTCG
CTCGGCGACGGCCTGCGCCCCGGCTCGATCTACGACGCGAACGACGAAGCGCAGCTCGGCGAACTGAAGACGCTCGGCGA
GCTCACGCAGATCGCATGGAAGCACGACGTGCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCAGCTGATCAAGG
AGAACATGGATCTCCAGCTCGACTGGTGCAAGGAAGCGCCGTTCTACACGCTCGGGCCGCTGACCACCGACATCGCACCG
GGCTACGACCACATCACGTCGGGCATCGGCGCCGCGATGATCGGCTGGTTCGGCACCGCGATGCTGTGCTACGTGACGCC
GAAGGAACACCTCGGACTGCCGAACAAGGACGACGTGAAGGAAGGCATCATCACGTACAAGCTCGCCGCGCACGCGGCCG
ACCTCGCCAAGGGTCACCCCGGCGCGCAGGTGCGCGACAACGCGCTGTCGAAGGCGCGTTTCGAGTTCCGCTGGGAAGAC
CAGTTCAACATCGGTCTCGATCCGGACAAGGCGCGCGAATTCCACGACGAGACGCTGCCGAAGGATTCGGCTAAGGTCGC
CCACTTCTGCTCGATGTGCGGCCCGCACTTCTGCTCGATGAAGATCACGCAGGACGTGCGCGAGTTCGCCGCGCAGCAGG
GCGTGTCGGAAACCGAGGCGCTGAAGAAGGGGATGGAAGTCAAGGCGGTCGAGTTCGTGAAGACCGGCGCCGAGATCTAT
CACCGTCAGTAA

Protein sequence :
MNANPKFLSADAHVDAAAVAPLPNSRKVYVTGSQPDIRVPMREITQADTPTGFGGEKNPPIYVYDTSGPYTDPDAKIDIR
AGLPALRQGWIEARGDTEVLDGLSSQYGLERAADPATADLRFPGLHRNPRRAQPGKNVTQMHYARQGIITPEMEYIAIRE
NQRRAEYIESLKSSGPNGAKLAAMMGRQHPGQAFGAAAFGANALAEITPEFVRDEVARGRAIIPANINHPESEPMIIGRN
FLVKINANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLT
WEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTANRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEEICEIMKAYDVSFS
LGDGLRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLDWCKEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWED
QFNIGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREFAAQQGVSETEALKKGMEVKAVEFVKTGAEIY
HRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 76
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 76
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 73