Name : rpsN (cce_0081) Accession : YP_001801499.1 Strain : Genome accession: NC_010546 Putative virulence/resistance : Unknown Product : 30S ribosomal protein S14 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0199 EC number : - Position : 76632 - 76934 bp Length : 303 bp Strand : + Note : located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are prese DNA sequence : ATGGCTAAAAAAAGCATGATCGAGCGTGAAAAAAAGCGCGAACGTTTAATTGCAAAATATGCTGAAAAACGGGCAGCCCT CAAAGAAGCCTTTGAAAACGCCGAAGATTTTGAAGAAAAAATCGAAATTCATCGTCAAATCCAACGTTTACCCCGTAATA GTGCGCCCAGTCGTCACCGTAATCGTTGCTGGTTAACAGGTCGTCCTAGAGGCTACTATCGTGATTTTGGCCTATCCCGC AACGTCCTCAGAGAATGGGCCCACGAAGGGTTATTACCTGGGGTCGTTAAATCCAGTTGGTAG Protein sequence : MAKKSMIEREKKRERLIAKYAEKRAALKEAFENAEDFEEKIEIHRQIQRLPRNSAPSRHRNRCWLTGRPRGYYRDFGLSR NVLREWAHEGLLPGVVKSSW |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rpsN | NP_814350.1 | 30S ribosomal protein S14 | Not tested | Not named | Protein | 9e-12 | 48 |
ef0103 | AAM75306.1 | EF0103 | Not tested | Not named | Protein | 6e-12 | 48 |