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Name : clpC1 (cce_4247) Accession : YP_001805661.1 Strain : Genome accession: NC_010546 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease regulatory subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4380022 - 4382490 bp Length : 2469 bp Strand : - Note : - DNA sequence : ATGTTTGAACGCTTTACAGAAAAAGCTATCAAGGTAATAATGCTGGCGCAAGAAGAAGCTCGTCGGCTCGGCCACAACTT CGTTGGGACCGAACAAATTCTTCTTGGCCTCATCGGTGAAGGAACTGGAGTTGCAGCCAAAGTTCTCAAATCAATGGGTG TTAACCTTAAAGATGCTCGGATTGAAGTTGAGAAAATTATTGGCCGCGGTTCAGGGTTTGTCGCCGTTGAAATTCCTTTT ACCCCAAGAGCAAAACGAGTTCTAGAACTCTCCTTAGAGGAAGCTAGACAATTAGGACACAACTATATCGGTACTGAACA CCTTCTCTTAGGTTTAATTAGAGAAGGGGAGGGCGTAGCGGCCAGAGTTCTCGAAAATCTCGGTGTCGACCTCTCCAAAG TCAGAACCCAGGTCATTCGCCAATTAGGGGAAACCGCAGAGGTGGCCGCCGGCGGTGGTACACCGGGCAGAACCAAAACC CCTACCTTAGACGAATTCGGTTCCAATTTAACCCAGTTGGCCGCAGATGGACAACTTGATCCCGTTGTGGGACGACAAAA AGAAATTGAACGGGTGATCCAAATTCTCGGTCGTCGTACCAAAAACAACCCCGTTCTCATCGGAGAACCCGGTGTTGGTA AAACAGCGATCGCAGAAGGGTTAGCCCAACGCATCGCTAACAAGGATATTCCTGATATCCTCGAAGAAAAACGAGTCGTT ACCCTCGATATCGGTCTATTGGTGGCAGGAACCAAGTACCGTGGAGAATTTGAAGAACGACTCAAGAAGATTATGGACGA AATTCGTCAAGCAGGAAACGTCATCCTGGTTATTGACGAAGTTCATACCCTCATCGGTGCCGGTGCAGCCGAAGGAGCGA TCGACGCTGCCAATATTCTCAAACCAGCCTTAGCACGGGGCGAATTACAATGTATTGGGGCGACAACCCTAGATGAATAC CGTAAACACATCGAACGGGATGCAGCCTTAGAACGTCGTTTCCAACCCGTGATGGTGGGTGAACCTTCTGTAGAAGAAAC CATCGAAATTCTCTACGGACTCAGAGAACGCTACGAGCAGCATCATAAGCTGAAAATCTTAGATGAGGCTCTAGAAGCAG CGGCCAAACTGTCAGATCGTTACATTTCTGACCGTTATCTCCCTGATAAGGCGATCGATCTTATTGACGAAGCAGGATCA CGGGTACGCTTAATCAATTCTCAACTGCCTCCTGCCGCCAAGGAATTAGACAAAGAACTACGCACCATCTTGAAGCAAAA AGATGACGCAGTTCGCTCCCAAGACTTTGATCGCGCTGGAGAATTGCGAGATCAAGAAATGGATATTAAGGAGCAAATTC GTTCTATTTCCTCTGCTAAAAAAGGAGAAGGAGAAAATGACGAGCCTTTTGTAGATTCCGAAGAAATCGCCCACATTGTG GCTTCTTGGACTGGGGTTCCTGTGAACAAGTTGACGGAAACAGAATCCGAGAAACTTCTACACATGGAAGACACCCTACA TCAACGTTTAATCGGTCAAGAAGATGCGGTTAAAGCGGTTTCGAGAGCGATTCGTCGGGCAAGGGTTGGCTTAAAGAACC CCAACCGTCCTATTGCTAGTTTCGTCTTCTCTGGACCGACTGGTGTTGGTAAAACTGAGTTAACCAAAGCATTGGCGACC TATTTCTTTGGGTCAGAAGAAGCCATGATTCGTCTGGATATGTCCGAATACATGGAACGCCATACGGTGTCTAAGTTAAT TGGTTCTCCTCCAGGATATGTGGGCTATAACGAAGGAGGACAACTGACCGAGGCGGTTCGCCGTCGTCCCTATACTGTTG TGCTATTCGATGAAATTGAAAAAGCACACCCTGATGTCTTCAATATGCTTCTGCAAATCTTAGAAGACGGTCGTTTAACG GACGCTAAAGGGCGTACTGTGGACTTTAAGAATACCTTATTGATTATGACCTCTAACATTGGTTCTAAGGTCATTGAGAA AGGTGGCGGTGGTCTTGGATTTGAGTTTGAAGATGACCAAAATGAGGCACAGTACAACCGTATTCGTAACCTGGTTAATG AAGAATTGAAGCAATACTTCCGACCTGAGTTCCTCAACCGACTCGATGAAATTATCGTCTTCCGTCAGTTGAATAAGGAA GAGGTCAAGCAAATTTCCGAGATTCTCCTCAAAGAAGTATTTGCACGGTTAACTGAGAAAGAGATTACCTTGCAAGTTAC TGATAAATTCAAGGAACGCTTGGTAGAAGAAGGGTATAACCCTGCTTATGGTGCAAGACCCTTACGTCGTGCTATTATGC GTCTTCTAGAGGATGTTCTTGCAGAGGAAATTCTCTCCGGACGAGTTGGCGAAGGCGATGTCGCTGTCGTTGATATCGGC GAAGACGGCAAAGTTAAAGTGGTTTCTGGTGATACCCAACCCGTTTTAGCGAAAGCGACTGACTCGTAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRQLGETAEVAAGGGTPGRTKT PTLDEFGSNLTQLAADGQLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVV TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY RKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGS RVRLINSQLPPAAKELDKELRTILKQKDDAVRSQDFDRAGELRDQEMDIKEQIRSISSAKKGEGENDEPFVDSEEIAHIV ASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAT YFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLT DAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLNKE EVKQISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVGEGDVAVVDIG EDGKVKVVSGDTQPVLAKATDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC1 | YP_001805661.1 | ATP-dependent Clp protease regulatory subunit | VFG0079 | Protein | 0.0 | 60 |
| clpC1 | YP_001805661.1 | ATP-dependent Clp protease regulatory subunit | VFG0080 | Protein | 2e-153 | 54 |
