Gene Information

Name : dnaB1 (cce_3405)
Accession : YP_001804819.1
Strain :
Genome accession: NC_010546
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 3503205 - 3504548 bp
Length : 1344 bp
Strand : -
Note : -

DNA sequence :
TTGATCATGGTTGTTAATCAAACCCTTCCTCCCCAAAATATTGAAGCTGAAGAGTCTATTTTAGGTGGAATTTTGCTTGA
TCCTGAAGCAATGGGACGGGTGGTAGATTTAATAACCCCAGAAGCGTTTTATATACAGTCCCATAAAGATATTTATCATG
CAGCCTTAAAGTTACATGGACAGGGACAACCGACAGATTTTTTAACGGTTAAAAGCACTTTAGAAGATCACCATTTATTA
GAAAAAATTGGTGGATTAAATAAATTAACTCAGTTATTGGATAGGACAGTTTCTGCTGTGAATATTGACCGTTACGCAAC
TTTGGTAATGGATAAATATTTACGCCGACAATTGATTGCTGCGGGTCATGAAATTGTTGATTTAGGATTTGAAACAACTC
AAGAATTAGAAATTGTTTTAGATGAGTCAGAAAAAAAGATTTTTGCCTTAACTCAAAAGCGTCCTCAAGAGGGATTAATT
CCTATTTCTGATACTATTATTAAAACATTTAATGAGTTAGAGAAACTTCATGAACAAACGGCACTTCCAGGTATCGAAAC
CGGGTTTTATGACCTAGATGCGATGACGGGAGGATTGCAACGTTCTGACTTAATTATAATAGCGGGTCGTCCATCTATGG
GCAAGACAGCATTCGGGTTGGGAATGGCCGCAAATATTGCCAAAAACTTTGATTTACCGGTGGCAATGTTCAGTTTAGAA
ATGTCAAAAGAACAACTTTCTATGCGTTTATTAGCAGCAGAAGCAGGAATCGAAAGTAACCGTTTGCGATCCGGTAGATT
TGTTCAAAATGACTATGAAAAGATTAGTATTGCTATTGGAACTTTATCCAATTTACCGATTTATATCGATGATGCTGCTA
ACATTACAGTGACCCAAATTCGATCCCAAGTTCGTCGTCTGTTAGCAGAAAAAAAAGGAGAATTTGGTTTAGTTTTGATC
GACTATTTACAATTAATGGAAGGTGCAGGTAGTGAAAATAGAGTTCAAGAATTATCAAAAATAACCCGTTCTTTGAAGGG
TTTAGCCCGTGAAATTAAAGCCCCTGTGATTGCTTTATCTCAATTGAGTCGTGCAGTTGAAGCGAGAAATAATAAGCGTC
CGATGATGTCAGATTTACGAGAAAGTGGTGCTATTGAACAAGATGCAGATTTAATTATGATGTTATATCGAGACGAATAT
TACAACCCCGATACCGTTGATAGAGGAATAGCTGAAATTCTTTTAACCAAGCATCGTAACGGACCGACGGGAACCGTCAG
ACTATTATTTCAGCCAGAATTAACTAAATTTTTGAATATGCAAACCAGTTCTAATTATGCCTAA

Protein sequence :
MIMVVNQTLPPQNIEAEESILGGILLDPEAMGRVVDLITPEAFYIQSHKDIYHAALKLHGQGQPTDFLTVKSTLEDHHLL
EKIGGLNKLTQLLDRTVSAVNIDRYATLVMDKYLRRQLIAAGHEIVDLGFETTQELEIVLDESEKKIFALTQKRPQEGLI
PISDTIIKTFNELEKLHEQTALPGIETGFYDLDAMTGGLQRSDLIIIAGRPSMGKTAFGLGMAANIAKNFDLPVAMFSLE
MSKEQLSMRLLAAEAGIESNRLRSGRFVQNDYEKISIAIGTLSNLPIYIDDAANITVTQIRSQVRRLLAEKKGEFGLVLI
DYLQLMEGAGSENRVQELSKITRSLKGLAREIKAPVIALSQLSRAVEARNNKRPMMSDLRESGAIEQDADLIMMLYRDEY
YNPDTVDRGIAEILLTKHRNGPTGTVRLLFQPELTKFLNMQTSSNYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-76 42
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-73 41
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-73 41