Gene Information

Name : ribD (cce_3260)
Accession : YP_001804674.1
Strain :
Genome accession: NC_010546
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 3374168 - 3375262 bp
Length : 1095 bp
Strand : -
Note : -

DNA sequence :
ATGATGACTCCAGATAACGTTGATCAACAAATGATGCAAAGATGTTTAACTTTAGCCCGTCGAGGTTTGGGTTATACCTC
TCCTAACCCTTTGGTGGGTGCGGTTATTGTTAAAGAGGGGAAAATTATCGGAGAAGGATTTCACCTCAAAGCCGGAGAAC
CCCATGCAGAAGTTTTTGCCTTACGAGAGGCAGGGGAAAAGGCCGTAGGAGGGACGGTTTATGTCAATTTAGAACCCTGC
AACCATTATGGTCGCACACCCCCCTGTACAGAAGCATTAATTTCGGCTAAAGTCGCTAGGGTCGTAGTGGGTATGGTCGA
TCCTAACCCATTAGTTTCAGGAAAGGGTATTGCGAGATTACAAGAGGCCGGAATAGAGGTTACAGTTGGGGTTGAAGAAG
CAGCCTGTCTCCGCTTAAATGAAGCTTTTTGTCATCGCATTCTTCATAATCAGCCATTTGGTATCCTCAAGTATGCCATG
ACCCTTGATGGTAAAATTTCCAGCAGTACAGGCCATAGTGCTTGGGTAACGGGAACAAAGTCTCGGCAATTGGTTCATGA
AATGAGGGCTGGTTGTGATGCGGTGATCGTCGGGGGGAATACAGTTCGTCGGGATAATCCCCATTTGACTATTCATCAAG
CTACTGGACGCAATCCTTTGCGAGTGGTAATGAGTCGTAATTTACATCTACCTCAAGACGCTAATCTCTGGAATGTTGAG
ATAGCACCGACTATTGTGTTTACAGAATGGGGCAAAAATCCCTCTCTACAAACACAGTTACGAAGGAAAGGGGTAGAAGT
GATTGAATTATCTCCTCTAATCCCTTCTCAGGTGATGGATGTTCTATGTGAACGACAATTATCCAGCATTTTGTGGGAAT
GTGGGGGAGTTTTAGCAGCAGAAGCCATTGCCCAAGGGGGAATTCAAAAAATTATGGCATTTATTGCCCCGAAAATCATC
GGCGGTTTCTCAGCTGCTTCTCCTGTAGGCAATTTAGGCTTAGAAAAAATGTCTGATGCTTTATCATTACAAAATGTTAG
TCTGCGTCAAGTGGATAGAGATATTTTAGTGGAAGGGTATTTGAACAAAGTCTAA

Protein sequence :
MMTPDNVDQQMMQRCLTLARRGLGYTSPNPLVGAVIVKEGKIIGEGFHLKAGEPHAEVFALREAGEKAVGGTVYVNLEPC
NHYGRTPPCTEALISAKVARVVVGMVDPNPLVSGKGIARLQEAGIEVTVGVEEAACLRLNEAFCHRILHNQPFGILKYAM
TLDGKISSSTGHSAWVTGTKSRQLVHEMRAGCDAVIVGGNTVRRDNPHLTIHQATGRNPLRVVMSRNLHLPQDANLWNVE
IAPTIVFTEWGKNPSLQTQLRRKGVEVIELSPLIPSQVMDVLCERQLSSILWECGGVLAAEAIAQGGIQKIMAFIAPKII
GGFSAASPVGNLGLEKMSDALSLQNVSLRQVDRDILVEGYLNKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-48 42
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-48 42