|
Name : sigC (cur_1885) Accession : YP_001801278.1 Strain : Corynebacterium urealyticum DSM 7109 Genome accession: NC_010545 Putative virulence/resistance : Unknown Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 2190303 - 2190965 bp Length : 663 bp Strand : + Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : ATGAGCAACTTCTCTCCCTCCTCCACTGGCCGCCACGGCCACACCGCCGAGGTCGACGCGCACGTCACCGACCTCGCGCT GCGCGCCGCCCGGGGAGATAAGGCAGCGCTCAACGAGTTCATCGCCGCCACCCACGATGACGTCTGGCGGCTGCTGGCCC ACTTGGCGAACCCAGACCAGGCGGATGACCTCACCCAGGAGACCTACCTGCGGGTACTCTCCGCCCTCCCCCGCTTCGCC GCCCGTTCCACGGCCCGCACCTGGATCCTTTCCCTGGCCCGGCGCGTGTGGGTGGATAGCATCCGCCACGATATGGCCCG CCCCCGCAAGTCCGCCGCCGAGTGGGAGGACGCCGCCGGAGATACCCCCGCGGCAGAGACCACGGGTGGCTCCAGCTGGG TGGAGTGGCTGGACACCCAGGACATGCTCAACTCCCTGGAGCCGGACCGCCGGGAGGCGCTGATCCTCACCCAGATGCTG GGCTACACCTACGCGGAGGCCGCGAAGATCGCGAACGTACGAACCGGCACCATTCGCTCCCGTGTTGCCCGCGCCCGGGC CGAGCTGGTCGATATGCAGCAGGCACAGCAGGCCCGCCAGGAGCGCCAGCAGGCAGAGACCACCGGGACCACCCGCCTGG GGCGGCGGCTGTGGCAGGCGTAG Protein sequence : MSNFSPSSTGRHGHTAEVDAHVTDLALRAARGDKAALNEFIAATHDDVWRLLAHLANPDQADDLTQETYLRVLSALPRFA ARSTARTWILSLARRVWVDSIRHDMARPRKSAAEWEDAAGDTPAAETTGGSSWVEWLDTQDMLNSLEPDRREALILTQML GYTYAEAAKIANVRTGTIRSRVARARAELVDMQQAQQARQERQQAETTGTTRLGRRLWQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 3e-49 | 69 |
