|
Name : cur_1804 (cur_1804) Accession : YP_001801197.1 Strain : Corynebacterium urealyticum DSM 7109 Genome accession: NC_010545 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2095298 - 2097880 bp Length : 2583 bp Strand : - Note : - DNA sequence : ATGAGCTCCTTCACCCCAACCACCATGACCCGCGAAGCAATGCAGACCGCCCTTCAGGACGCGTCGAACCGCGGGAACCC GGACATCCGCCCCGGCCACCTGCTGGTGGCCCTGCTCGAGCAGCAGGACTCCATTACCCAGCCGATCCTCACCGCAGCTG GCGTCAACGCCGACGCAGTGCGGACCCAGGCGAAGTCCCTCGTGGAGGGTTACCCCACCGCGCAGGGCTCCGGCATGGCC AATCCGCAGTTCAACCGCGACGCCCTGAACGCCATGACGGCCGCCCAGGAACTCGCTGGGGAACTCGGTGACACTTACGT CTCCACCGAGGTGCTGCTCACCGGTATCGCTAAGGGCAACTCGGACGCCGCGACGATTCTGCACAACCTGGGTGGCACTT TTGACGCCCTGCGTGGCGCTTTCGAAAGCGTGCGTGGCAACCGCAAGGTCACCACCGAAGAGCCGGAGGGCCAGTTCCAG GCCCTCGAGAAGTACTCCACCGACCTCACCGCCGCCGCCCGCGCCGGGAAGATCGACCCGGTCATCGGCCGCGACCAGGA GATCCGCCGCGTGGTCCAAGTGCTATCGAGGCGCACGAAAAATAACCCCGTGCTCATCGGCGAACCGGGCGTGGGTAAGA CCGCGATCGTCGAGGGACTGGCCCGCCGCATCGTCGCGGGCGACGTCCCCGAATCCCTGAAGGGTAAGAAGCTGGTCTCC CTCGACCTGGGCGCGATGCTCGCGGGCGCGAAGTACCGCGGCGAGTTCGAGGAGCGCCTGAAGGCCGTCCTCGACGAGAT CAAGGAAGCCGACGGCGAGATCGTCACCTTCATCGACGAGCTGCACACCATCGTCGGCGCTGGCGCCGGCGGCGACTCTG CGATGGATGCCGGCAACATGATCAAGCCGCTGCTCGCCCGCGGTGAGCTGCGCCTGGTCGGTGCGACCACCCTGGACGAG TACCGCCAGCACATTGAGAAGGACCCGGCCCTGGAGCGCCGCTTCCAGCAGGTCTACGTCGGCGAGCCGACCCCGGAGGA TACCATCGGTATCCTCCGTGGGCTCAAGGAACGCTACGAGGTGCACCACGGTGTCCGCATCCAGGACTCCGCCCTGGTCG CCGCCGCCAGCCTCTCGGATCGCTACATCACCAGCCGCTTCCTGCCGGATAAGGCCATCGACCTGGTCGACGAGGCTGCC TCCCGCCTGCGCATGGAGATCGACTCCCGACCGGAGGAGATCGACAACGCCGAGCGCATCGTCCGCCGCCTCGAGATCGA GGAGATGGCCCTGGCCAAGGAGACTGACGCCGCCTCCAAGGACCGTCTCGAGCGCCTGCGCTCGGAGCTGGCCGATGAGA AGGAGAAGCTCGCCGGCCTGACCGCCCGCTGGGAGAATGAGAAGTCCAGCATCGACTCGCTGCGCGGAATCAAGGAGGAG CTCGACGCCCTGCGCCGGGACTCCGAGATCGCGGAGCGCGACGGCGACTACGCCAAGGTCGCTGAGCTGCGCTACGGCCG CATCCCGGACGTCGAACGGCGCCTGGAGGAGGCAGAGCAGGCCCAGGCCAAGGCGCAGGCCGGCAACCAGGAGATGATGC TCACCGAGGAAGTCACCCCGGACACCATCGCCGAGGTCGTCTCCGCGTGGACCGGCATCCCGGCCGGCAAGATGCTGCAG GGAGAAACCGAGAAGCTGCTGGAGATGGAGAGCGTCCTGGCAGGTCGCGTCGTCGGCCAGAAGGATGCAGTCAACGCGGT CTCCGACGCCGTGCGCCGCGCGCGTGCCGGCGTGGCCGACCCGAACCGTCCGACCGGCTCCTTCCTCTTCCTCGGCCCCA CGGGCGTGGGTAAGACGGAGCTGGCCAAGGCGCTGGCGGAGTTCCTCTTCGACGACGAGCACGCGATGGTCCGCATCGAC ATGTCCGAGTTCGGCGAGAAGCACTCCGTCGCCCGCCTGGTCGGTGCCCCTCCGGGATACGTCGGTTACGACCAGGGCGG ACAGCTGACCGAGGCGGTGCGCCGTCGCCCGTACACGGTCGTGCTCTTCGACGAGGTGGAGAAGGCCCACCCGGACGTCT TCGACATCCTGCTGCAGGTTCTCGACGAGGGCCGCCTGACTGATGGCCAGGGACGGACGGTGGACTTCCGCAACACGATG CTGATCCTGACGTCCAACCTGGGCGCCGGCGGTAACCACGAGCAGATCATGGACGCGGTGAAGGCCCACTTCAAGCCGGA GTTCATCAACCGCCTGGATGACGTGCTGATCTTTGACCCGCTGTCCGAGGAGCAGCTGGAGCACATCGTGGACATCCAGA TCGGCGGGCTGGCGGATCGCCTGGCCTCCCGCCGCCTCACCCTGGATGTCTCCCCGGAGGCGAAGGCTTGGCTGGCCAAG CGTGGCTATGACCCGGCCTACGGTGCCCGCCCGCTGCGCAGGCTGATCCAGAAGGCCATCGGCGATGCTCTGGCCAAGGA GCTGCTCTCCGGCGCGATTCGGGACGGCGATACCGTCCGTGTGGACGTGGACCCGCACGAGGTCGAGGGCGTGGACAGCC TCTGGATTCACCGCGGCGAGTAA Protein sequence : MSSFTPTTMTREAMQTALQDASNRGNPDIRPGHLLVALLEQQDSITQPILTAAGVNADAVRTQAKSLVEGYPTAQGSGMA NPQFNRDALNAMTAAQELAGELGDTYVSTEVLLTGIAKGNSDAATILHNLGGTFDALRGAFESVRGNRKVTTEEPEGQFQ ALEKYSTDLTAAARAGKIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKKLVS LDLGAMLAGAKYRGEFEERLKAVLDEIKEADGEIVTFIDELHTIVGAGAGGDSAMDAGNMIKPLLARGELRLVGATTLDE YRQHIEKDPALERRFQQVYVGEPTPEDTIGILRGLKERYEVHHGVRIQDSALVAAASLSDRYITSRFLPDKAIDLVDEAA SRLRMEIDSRPEEIDNAERIVRRLEIEEMALAKETDAASKDRLERLRSELADEKEKLAGLTARWENEKSSIDSLRGIKEE LDALRRDSEIAERDGDYAKVAELRYGRIPDVERRLEEAEQAQAKAQAGNQEMMLTEEVTPDTIAEVVSAWTGIPAGKMLQ GETEKLLEMESVLAGRVVGQKDAVNAVSDAVRRARAGVADPNRPTGSFLFLGPTGVGKTELAKALAEFLFDDEHAMVRID MSEFGEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTM LILTSNLGAGGNHEQIMDAVKAHFKPEFINRLDDVLIFDPLSEEQLEHIVDIQIGGLADRLASRRLTLDVSPEAKAWLAK RGYDPAYGARPLRRLIQKAIGDALAKELLSGAIRDGDTVRVDVDPHEVEGVDSLWIHRGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-92 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cur_1804 | YP_001801197.1 | ATP-dependent Clp protease, ATP-binding subunit ClpB | VFG2076 | Protein | 4e-109 | 41 |
