Gene Information

Name : cur_1684 (cur_1684)
Accession : YP_001801078.1
Strain : Corynebacterium urealyticum DSM 7109
Genome accession: NC_010545
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1953769 - 1956453 bp
Length : 2685 bp
Strand : -
Note : -

DNA sequence :
ATGTTCGAAAGGTTTACCGACCGGGCACGACGCGTTGTCGTCTTGGCACAAGAGGAAGCGCGAGCGCTGAATCACAATTA
CATCGGTACCGAGCACATCCTCCTGGGGTTGATCCAAGAGGGTGAGGGCGTAGCTGCCAAGGCGCTCGAGTCCATGGGAA
TTTCCCTCGACGCGGTGCGCACCGAGGTGAAGGAGATCATCGGTTCCGGTGGCAACCCGCCGAGCGGTTATATCCCGTTT
ACCCCGCGCGCCAAGAAGGTGCTGGAGCTGGCTCTGCGCGAGGCGCTGCAGCTTGGCCACAAGTACATCGGCACTGAGCA
CATCCTGCTCGGCCTCATCCGCGAGGGCGAGGGCGTCGCTGCCCAGGTGCTGGTGAAGCTGGGCGCCGATCTGTCCCGCG
TTCGCCAGCAGGTTATCCAGCTGCTTTCCGGCTACGAGGGTGGCGGCGAGCACGAGGAGGCCCCGGACCAGCCGGCCGTG
GCCGGTGTCGCCCCGTCCGGCCAGGGCGGAGCCAAGGCAGGCCAGAAGTCCAACTCCCTGGTCCTGGACCAGTTCGGTCG
CAACCTCACGCAGGCTGCCAAGGACGGCAAGCTGGACCCCGTCGTCGGCCGCGCCGGCGAGATCGAGCGCATCATGCAGG
TGCTCTCCCGCCGCACCAAGAACAACCCGGTGCTCATCGGTGAGCCGGGTGTGGGTAAGACTGCCGTCGTCGAGGGCCTG
GCCCTGGATATCGTCAACGGCAAGGTCCCGGAGACCCTGCGCGATAAGCAGGTTTACTCCCTGGATCTGGGTTCCCTGGT
TGCTGGCTCCCGCTACCGTGGTGACTTCGAGGAGCGCCTGAAGAAGGTGCTCAAGGAGATCAACCAGCGTGGCGACATCA
TCCTGTTTATCGACGAGATCCACACCCTCGTCGGTGCCGGTGCCGCGGAGGGCGCGATCGACGCCGCCTCCATCCTGAAG
CCGAAGCTGGCCCGCGGCGAGCTGCAGACCATCGGTGCCACCACGCTGGAGGAGTACCGCAAGCACATCGAGAAGGACGC
CGCCCTGGAGCGCCGCTTCCAGCCGGTGCAGGTGCCGGAGCCGTCCGTCGCGGACACCATCGAGATCCTGAAGGGTCTGC
GCGACCGCTACGAAGCCCACCACCGCGTGTCCATCACCGATGGTGCCCTGCGTTCCGCAGCCACTCTCGCCGACCGCTAC
ATCAACGACCGCTTCCTGCCGGATAAGGCCGTCGACCTGCTCGACGAGGCGGGCGCGCGCATGCGTATCAAGCGTCTCAC
CGCGCCGAAGTCCGTCCAGGAAGTTGACGATAAGATCGCCGAGGTCCGCCGCAAGAAGGAGGCCGCGATCGATGAGCAGG
ACTTCGAAAAGGCAGCAGCACTGCGCGACGACGAGCGCACCCTGACCGAGGAGCGCGCCGAGAAGGAGAAGGCTTGGCGC
GCCGGCGAGCTCGATGAGGTCGCCGAGGTCGACGAGGAGCAGATCGCAGAGGTGCTGGCCAACTGGACCGGCATCCCAGT
GTTCAAGCTGACGGAGGAGGAGTCCTCCCGCCTGCTGGACATGGAGGGCGAGCTGCACAAGCGCATCATTGGCCAGGACG
ATGCCGTCAAGGCCGTCTCCCGCGCGATCCGCCGCACCCGTGCCGGCCTGAAGGACCCGAACCGCCCGTCCGGCTCCTTC
ATCTTCGCTGGTCCGTCCGGTGTGGGTAAGACGGAGCTGTCCAAGGCGCTCGCCGAGTTCCTCTTCGGTGACGACGACGC
CCTGATCCAGGTGGACATGGGTGAGTTCCACGACAAGTTCACCGCCTCCCGCCTGTTCGGTGCCCCTCCGGGATACGTCG
GTTACGACGAGGGCGGCCAGCTGACCGAGAAGGTCCGCCGCAAGCCGTTCTCCGTCGTTCTCTTCGATGAGATCGAGAAG
GCCGATAAGGACATCTACAACACCCTGCTGCAGGTGCTGGAGGAAGGTCGTCTGACCGATGGCCAGGGCCGCATCGTGGA
CTTCAAGAACACGGTGCTGATCTTCACCTCGAACCTGGGTACCAGGGATATCTCCAAGGCCGTGGGCATGGGCTTCTCCA
ACGCCGGCGAGCAGGATGAGGCCGCGCAGTACGAGCGGATGAAGTCCAAGGTGGATGACGAGCTGAAGAAGCACTTCCGC
CCGGAGTTCCTGAACCGTATCGACGACATCGTGGTCTTCCACCAGCTCACCCGCGAGCAGATCGTCCAGATGGTGGACCT
GCTCATGGGCCGCGTCCGCCGCGCCCTGGAGGACAAGGACATGGGCATCGAGGTCACCGAGAAGGCCAAGAACCTACTCG
CCAAGCGTGGCTTCGACCCGGTTCTGGGTGCCCGCCCGCTGCGTCGCACGATCCAGCGCGAGATCGAGGACGAGCTCTCC
GAGAAGATCCTCTTCGGCGAGTTCGGTGCCGGCGAAATCGTCACCGTGGACGTGGAGAACTGGGACGGCGAGTCCGCCGG
CAAGGATGCGAAGTTCGTCTTCGGCTCCAAGCCGAAGCCGCTGCCGGAGTTCGACGCCGCTGACTTCGAGGTCGAGCGCG
GCGAGGAGCACCACAGCCCGGCCGAGGAGGCCAAGGCCTCTGTCGCCTCCGCGGCAGCCGGGGACGTGCCTGAGGAGGAC
GCTGCCGGCGAGAGCGCCGGCTCCGAGGGCAAGTCCGAGGACTAA

Protein sequence :
MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVRTEVKEIIGSGGNPPSGYIPF
TPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLLSGYEGGGEHEEAPDQPAV
AGVAPSGQGGAKAGQKSNSLVLDQFGRNLTQAAKDGKLDPVVGRAGEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGL
ALDIVNGKVPETLRDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILK
PKLARGELQTIGATTLEEYRKHIEKDAALERRFQPVQVPEPSVADTIEILKGLRDRYEAHHRVSITDGALRSAATLADRY
INDRFLPDKAVDLLDEAGARMRIKRLTAPKSVQEVDDKIAEVRRKKEAAIDEQDFEKAAALRDDERTLTEERAEKEKAWR
AGELDEVAEVDEEQIAEVLANWTGIPVFKLTEEESSRLLDMEGELHKRIIGQDDAVKAVSRAIRRTRAGLKDPNRPSGSF
IFAGPSGVGKTELSKALAEFLFGDDDALIQVDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEK
ADKDIYNTLLQVLEEGRLTDGQGRIVDFKNTVLIFTSNLGTRDISKAVGMGFSNAGEQDEAAQYERMKSKVDDELKKHFR
PEFLNRIDDIVVFHQLTREQIVQMVDLLMGRVRRALEDKDMGIEVTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDELS
EKILFGEFGAGEIVTVDVENWDGESAGKDAKFVFGSKPKPLPEFDAADFEVERGEEHHSPAEEAKASVASAAAGDVPEED
AAGESAGSEGKSED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cur_1684 YP_001801078.1 ATP-dependent Clp protease VFG0079 Protein 0.0 58
cur_1684 YP_001801078.1 ATP-dependent Clp protease VFG0080 Protein 2e-147 48