Name : hsdM1 (cur_0147) Accession : YP_001799541.1 Strain : Corynebacterium urealyticum DSM 7109 Genome accession: NC_010545 Putative virulence/resistance : Unknown Product : type I restriction-modification system, methyltransferase subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 175611 - 177197 bp Length : 1587 bp Strand : - Note : - DNA sequence : ATGACTCCCACCCCAATCAAGGAATTCGAGGACACTCTATGGAAGGCCGCCGATAAACTGCGCGGTTCCATGGATGCCTC TCAGTACAAGGACATCGTCCTCGGACTGGTGTTCCTCAAGTATGTGACCGATGCTTTCGACGCTCGCCGTCTCGAACTCC TGGCGGAGCTGGAGGAGGAAGGCGCCACCGCGGAAGAGATCGCGGAGGAGCTGGAGGACCGCGACGCCTACCTGGAGAAG AACGTTTTCTGGGTCGCTAAGGAGGCCCGCTGGGACTACCTGCAGCGCCACTCCAAGGGCAAGACAGATGACGCCGGCGG TGAGTTCAAGTCCATCGGCAAGCTCATTGACGAGGCCGCGGAGGCCCTGATGACCGATAACCTCTCCCTGGAAGGCACGC TGCCGCACAATTACAACAGCGATAGCGTGGACCAGCGCCGCCTGGGCGAGCTGGTGGACTTGTTCAGCACCACTCGCTTC ACCGCGGAAGGCCCGGAGCGGGCACGTGACCTGCTGGGTGAGGTGTACGAATACTTCCTCGCGCGCTTCGCTTCGGCGGA GGGTAAGCGCGGCGGCGAGTTCTACACCCCGCGCTCGGTGGTGCGCACGCTGGTGGAGATTCTCGAGCCGACCGAGGGCC GTGTTTACGACCCGTGCTGTGGTTCTGGTGGCATGTTCGTCCAGGCGGAGAAGTTCCTGGACGCCCACGATAAGGACCCG TCTGCGATTGCTATCTATGGCCAGGAGCTCAACGAGCGCACGTGGCGCTTGGCGCGGATGAACCTCGCTATTCACGCGTT GAATTCGAAGGGCCTGGGCGAGCGCTGGGGCGATACTTTCGCCCGGGACATCCACCCCGGTGTGGAGATGGATTACGTGC TGGCCAACCCACCGTTCAATATCAAGGACTGGGTGCGCAACACCGATGACAAGCGGTGGAGCTACGGTGTGCCGCCGGCG AAGAACGCGAACTTCGGGTGGATGCAGCACATCATCTCCAAGCTCAGCGCTCAGGGCGAGGCTGGTGTGGTGATGGCTAA TGGCACCATGACCTCAAATACCTCCGGTGAGGGTGAGATCCGCAAGAACATGCTTGAGGACGACATCGTCTCCTGCGTGG TTACGCTGCCTGCTCAGCTGTTCCGGGGCACGCAGATCCCGGTGTGCGTCTGGTTCTTCGCCAAGGATAAGGGCGCTGGT TCCAAGGGCTTCGTGGATCGTCGCGGGGAGTTCCTGCTGATCGATGCCCGCGAACTCGGCCACATGGTTGACCGCACGGA GCGCACCTTCTCGGACGAGGACATCCAGAAAATCGCGAATACCTTCCGCACCTGGCGTGGCCGCTCGTCCGCTGAGGGCG AGTACGAGGACGCCCCTGGTTACTGCAAGTCCGTCTCGCTGGACGAGATCCGCGAGGCTGATTACGCGCTCACTCCTGGC CGCTATGTCGGTTTCGCGGAGGAGGAAGAGGACGGCGAGCCGATCGACGAGAAGATCGCACGACTCACCGCGGAGCTCAC CGCAGCCCTGGACGAGTCCGCGCGCCTCAACGCCGTGGTCCGCGAGCAGCTGGGGAGGTTGGGCTAA Protein sequence : MTPTPIKEFEDTLWKAADKLRGSMDASQYKDIVLGLVFLKYVTDAFDARRLELLAELEEEGATAEEIAEELEDRDAYLEK NVFWVAKEARWDYLQRHSKGKTDDAGGEFKSIGKLIDEAAEALMTDNLSLEGTLPHNYNSDSVDQRRLGELVDLFSTTRF TAEGPERARDLLGEVYEYFLARFASAEGKRGGEFYTPRSVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLDAHDKDP SAIAIYGQELNERTWRLARMNLAIHALNSKGLGERWGDTFARDIHPGVEMDYVLANPPFNIKDWVRNTDDKRWSYGVPPA KNANFGWMQHIISKLSAQGEAGVVMANGTMTSNTSGEGEIRKNMLEDDIVSCVVTLPAQLFRGTQIPVCVWFFAKDKGAG SKGFVDRRGEFLLIDARELGHMVDRTERTFSDEDIQKIANTFRTWRGRSSAEGEYEDAPGYCKSVSLDEIREADYALTPG RYVGFAEEEEDGEPIDEKIARLTAELTAALDESARLNAVVREQLGRLG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 3e-125 | 51 |
hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 3e-125 | 51 |
hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 1e-124 | 50 |
api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 4e-95 | 45 |