Gene Information

Name : tnp7109-25 (cur_1459)
Accession : YP_001800853.1
Strain : Corynebacterium urealyticum DSM 7109
Genome accession: NC_010545
Putative virulence/resistance : Unknown
Product : transposase for insertion sequence
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1707208 - 1708128 bp
Length : 921 bp
Strand : -
Note : -

DNA sequence : 
ATGATCCAGTTCATCGATGAACACCGGGATCGTTTCACAGTCGAGTTCATCTGTCAGACGTTGAAGAGCAATCGGCAAGG
TGGCTTCATTTCCTCACGCGGATACCGTCAGTCAAAAGCCCGGGGATTAAGTACCCGCAGCCTTCGTGACGCCGCACTGA
CAAGGCATATTGCCGAGGTCCATGAAGAAAACTACGCAGTCTATGGTATCCGCAAGATGTGGCATGCTCTACGCCGTGAA
GGAATCGACATCGGCCGTGAGCAAACCGCTCGCCTGATGCGCCTTGCTGGAGTCAGTGGAAAAGGTAAAGGCCGGTTGCC
TGTGACAACTCGCAGGTCCAAGGGCTCGGATAATCGCCCTGACTTGGTGGGCCGTGATTTTCGTGCCGCTGGACCGAATC
GGTTATGGGTGGCTGACATTACCTACGTCCGTACCGGTAATGGGTTCGTCTACACCGCTTTTGTCACCGATGTGTACTCC
CGCAAAATTGTCGGATGGGCATTATCAGATACGATGCGCACGGAAGCGTTGCCACTACAAGCACTCAACCAGGCGATTGT
ATGCGCAAAGGAAACAACGGGACTGATTCACCATTCAGACCACGGCTCGCAGTATGTGAGCATTGTCTACAATGAGCGCC
TTGCTGAGCATGGAATCACTGCCTCTACTGGGACAGTCGGTGACTCCTACGACAATGCTTTGGCCGAGAACGTCAACGGT
TCTTACAAAAATGAGCTCATTCATAGGCGGTCGTGGACTGACGTGGTTGATGTTGAGATCGCGACGTTTGAGTGGGTCTC
GTGGTGGAACGAATCACGGCTTCACCAAAGTCTCGGCTACCGTACGCCGACAGAGGTAGAAGGAGAGTTTTGGACTGGCA
ATCCAAATCACGAGAAAATAGAAATCAAGGCGAATGCCTAG

Protein sequence : 
MIQFIDEHRDRFTVEFICQTLKSNRQGGFISSRGYRQSKARGLSTRSLRDAALTRHIAEVHEENYAVYGIRKMWHALRRE
GIDIGREQTARLMRLAGVSGKGKGRLPVTTRRSKGSDNRPDLVGRDFRAAGPNRLWVADITYVRTGNGFVYTAFVTDVYS
RKIVGWALSDTMRTEALPLQALNQAIVCAKETTGLIHHSDHGSQYVSIVYNERLAEHGITASTGTVGDSYDNALAENVNG
SYKNELIHRRSWTDVVDVEIATFEWVSWWNESRLHQSLGYRTPTEVEGEFWTGNPNHEKIEIKANA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 7e-141 100
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 1e-62 57
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 8e-48 49
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 2e-39 48
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 1e-39 48
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 3e-52 44
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 4e-52 44
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-52 44
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-52 44
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 3e-50 44
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-49 44
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-50 44
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-50 44
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-50 44
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-50 43
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-52 43
Z1198 NP_286733.1 transposase Not tested TAI Protein 6e-51 43
Z1638 NP_287141.1 transposase Not tested TAI Protein 6e-51 43
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 6e-49 43
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-52 43
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-52 43
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-50 43
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnp7109-25 YP_001800853.1 transposase for insertion sequence VFG1602 Protein 3e-49 43