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Name : serS (PAa_0596) Accession : YP_001799181.1 Strain : Candidatus Phytoplasma australiense Genome accession: NC_010544 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 590081 - 591337 bp Length : 1257 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATCTTAATTATGTAGTTAAAAACTTATCACATGTTTTGACCAAATTAGAAACAAGAAATCACCCCTTAGATGA TTTGAAAAAACTTCCTCTTTTATCTTCTCAAAGAAAAGAGTTGTTGTTAAAAATTCAAAAATTAAGACAACAAAAAAATA AAACAGCTCAAATAAATGCAACTCAACCACAAAACCTTTTAAAGAAGGATAATGATAAGTCTTTAACTCGTCATTTAGAG GAACAATTGAAAACAGTTGAAACTGCTATTTATGATATTTTAAGCAACACTCCTAATTTACCACACGATTCTTTGCCAAT TGGAAAAGATGAACAGGCCAATCAAGAAATAAGCCGTCATGGTGTAATTCCTCAGTTTGATTTTCCTGTCAAAGACCATG TTGCTTTAGCGAAAAAACTTGATATTTTAGATTTTGAAAAGGCTGCAAAAATTACTGGTAGTCGTTTTGTTGTTTGCAAA GGATTGGGTGCTCGTTTAGAAAGAGCTTTAATCCAATTCATGATGGATTTGCATAGTACAAAAGGTTATCAAGAAATCAT CCCTCCTTATATTATCAATGAAAAATCGATGTTTGCAACTGGTCAGTTGCCTAAATTTGAAGCAGAAGTTTTTAAAATAT CGCACCATAAAAATAATTGGTATCTTAATCCAACAGCTGAAGTCCCTACTATTAATTTACATCGTGATGAATTTTTTCCA CGCAACGCTTTACCATTAAAATATGTTGCTTACACAACTTCATTCCGCCAAGAAGCCGGTTCTGCAGGTTCTTATTCAAG AGGTATTTTTAGACAACATCAATTCAATAAAGTTGAATTAATCCAATTTTGTCATCCCCAAAATTCCTATTCTTTATTGG ATCAAATGTTGCAAGATTCGTGCGCTGTTTTGGATTTGTTAAAACTTCCATATAGAGTGATTGTTTTGTCAACAGGAGAT TTAGGTTTTGGGATGTCTAAAACTTATGATATAGAGGTTTTTATCCCAAGTTCTAATTGTTATCGCGAAATTGCCTCCAT TAGTAATTCTGAGAGTTTCCAATCTAGACGTGCTAATATTAAGTTCCATAATCCGAACAATAACAAAAAAGAATACCTTC ATATTTTAAATGGTTCTGGTTTAGCTATTGGAAGGACTGTGATTGCTATTTTAGAAAATTACCAAAATTCCGATGGCACT ATTCGCGTTCCTGAAGTTTTAATTCCTTTTTTAGGAACAGATATTATTAAGCGTTAA Protein sequence : MLDLNYVVKNLSHVLTKLETRNHPLDDLKKLPLLSSQRKELLLKIQKLRQQKNKTAQINATQPQNLLKKDNDKSLTRHLE EQLKTVETAIYDILSNTPNLPHDSLPIGKDEQANQEISRHGVIPQFDFPVKDHVALAKKLDILDFEKAAKITGSRFVVCK GLGARLERALIQFMMDLHSTKGYQEIIPPYIINEKSMFATGQLPKFEAEVFKISHHKNNWYLNPTAEVPTINLHRDEFFP RNALPLKYVAYTTSFRQEAGSAGSYSRGIFRQHQFNKVELIQFCHPQNSYSLLDQMLQDSCAVLDLLKLPYRVIVLSTGD LGFGMSKTYDIEVFIPSSNCYREIASISNSESFQSRRANIKFHNPNNNKKEYLHILNGSGLAIGRTVIAILENYQNSDGT IRVPEVLIPFLGTDIIKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-85 | 50 |
