|
Name : rpmE2 (Pnec_0637) Accession : YP_001797496.1 Strain : Polynucleobacter necessarius STIR1 Genome accession: NC_010531 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L31 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0254 EC number : - Position : 548376 - 548723 bp Length : 348 bp Strand : - Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g DNA sequence : ATGAAACCTGGCATTCACCCCGAATATCGTGAAATCGTCTTTGTAGACGTTTCTAATAACTTCAGCTTCAAAACTCGCTC CACAATGGCCACCAAAGAGACCATTAAGTGGGAAGATGGTAATGAATATCCATTGGCCAAGATCGAGACTTCATCTGAAT CACACCCTTTCTACACCGGCACTCAAAAGATTATGGATACTGCTGGTCGTGTTGAGAAATTCCGTCAGAAATTCGGTAGC AAGGCAGTTGCTAAGGCATCCGGTGATGGCGCAGCTAAAACAGCTGAGAAAAAAGCTGCTGCTGCAGAAGCTAAAGCTGC TGAAAAGCCAGTCAAGAAGAAGGCTTAA Protein sequence : MKPGIHPEYREIVFVDVSNNFSFKTRSTMATKETIKWEDGNEYPLAKIETSSESHPFYTGTQKIMDTAGRVEKFRQKFGS KAVAKASGDGAAKTAEKKAAAAEAKAAEKPVKKKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmE2 | NP_286687.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 1e-12 | 47 |
| rpmE2 | NP_287095.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 1e-12 | 47 |
